Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S2P59780 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S2P59780 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S2P59780 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.7■□□□□ 0.74
AP3S2P59780 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S2P59780 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S2P59780 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
AP3S2P59780 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S2P59780 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
AP3S2P59780 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S2P59780 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S2P59780 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.69■□□□□ 0.74
AP3S2P59780 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S2P59780 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
AP3S2P59780 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.69■□□□□ 0.74
AP3S2P59780 ECEL1P1-201ENST00000373592 1742 ntBASIC19.69■□□□□ 0.74
AP3S2P59780 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
AP3S2P59780 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.69■□□□□ 0.74
AP3S2P59780 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.69■□□□□ 0.74
AP3S2P59780 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S2P59780 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S2P59780 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
AP3S2P59780 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S2P59780 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
AP3S2P59780 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
AP3S2P59780 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S2P59780 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
AP3S2P59780 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.68■□□□□ 0.74
AP3S2P59780 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S2P59780 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S2P59780 ANOS2P-203ENST00000472227 1816 ntBASIC19.68■□□□□ 0.74
AP3S2P59780 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.68■□□□□ 0.74
AP3S2P59780 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.68■□□□□ 0.74
AP3S2P59780 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S2P59780 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S2P59780 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.68■□□□□ 0.74
AP3S2P59780 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S2P59780 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
AP3S2P59780 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S2P59780 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S2P59780 DUSP8P3-201ENST00000399571 1760 ntBASIC19.67■□□□□ 0.74
AP3S2P59780 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.67■□□□□ 0.74
AP3S2P59780 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S2P59780 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S2P59780 C1orf229-201ENST00000623686 2258 ntBASIC19.67■□□□□ 0.74
AP3S2P59780 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S2P59780 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S2P59780 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.67■□□□□ 0.74
AP3S2P59780 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S2P59780 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.67■□□□□ 0.74
AP3S2P59780 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
AP3S2P59780 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.66■□□□□ 0.74
AP3S2P59780 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.66■□□□□ 0.74
AP3S2P59780 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
AP3S2P59780 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S2P59780 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S2P59780 AC092068.2-201ENST00000590491 1708 ntBASIC19.65■□□□□ 0.74
AP3S2P59780 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S2P59780 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S2P59780 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.65■□□□□ 0.74
AP3S2P59780 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S2P59780 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S2P59780 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S2P59780 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
AP3S2P59780 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
AP3S2P59780 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
AP3S2P59780 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.64■□□□□ 0.74
AP3S2P59780 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3S2P59780 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3S2P59780 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3S2P59780 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3S2P59780 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
AP3S2P59780 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
AP3S2P59780 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.63■□□□□ 0.73
AP3S2P59780 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AP3S2P59780 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AP3S2P59780 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S2P59780 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AP3S2P59780 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.63■□□□□ 0.73
AP3S2P59780 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S2P59780 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S2P59780 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.63■□□□□ 0.73
AP3S2P59780 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S2P59780 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.63■□□□□ 0.73
AP3S2P59780 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
AP3S2P59780 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S2P59780 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
AP3S2P59780 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
AP3S2P59780 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AP3S2P59780 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms