Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.01■■□□□ 1.59
TTC3P53804 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.01■■□□□ 1.59
TTC3P53804 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.01■■□□□ 1.59
TTC3P53804 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25■■□□□ 1.59
TTC3P53804 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25■■□□□ 1.59
TTC3P53804 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25■■□□□ 1.59
TTC3P53804 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
TTC3P53804 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
TTC3P53804 PTCHD3P2-201ENST00000424937 1205 ntBASIC25■■□□□ 1.59
TTC3P53804 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
TTC3P53804 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.99■■□□□ 1.59
TTC3P53804 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TTC3P53804 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.99■■□□□ 1.59
TTC3P53804 SYT6-210ENST00000641643 1587 ntBASIC24.99■■□□□ 1.59
TTC3P53804 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TTC3P53804 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TTC3P53804 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TTC3P53804 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TTC3P53804 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
TTC3P53804 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
TTC3P53804 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.99■■□□□ 1.59
TTC3P53804 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TTC3P53804 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC3P53804 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC3P53804 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC3P53804 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.98■■□□□ 1.59
TTC3P53804 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC3P53804 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TTC3P53804 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.98■■□□□ 1.59
TTC3P53804 SLC6A10P-202ENST00000431994 2058 ntBASIC24.98■■□□□ 1.59
TTC3P53804 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
TTC3P53804 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.97■■□□□ 1.59
TTC3P53804 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.97■■□□□ 1.59
TTC3P53804 SERBP1P1-201ENST00000396021 1160 ntBASIC24.97■■□□□ 1.59
TTC3P53804 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
TTC3P53804 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.97■■□□□ 1.59
TTC3P53804 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.97■■□□□ 1.59
TTC3P53804 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TTC3P53804 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TTC3P53804 AC104564.3-201ENST00000582367 638 ntBASIC24.96■■□□□ 1.59
TTC3P53804 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.96■■□□□ 1.59
TTC3P53804 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TTC3P53804 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.96■■□□□ 1.59
TTC3P53804 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
TTC3P53804 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
TTC3P53804 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
TTC3P53804 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TTC3P53804 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
TTC3P53804 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.95■■□□□ 1.58
TTC3P53804 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
TTC3P53804 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TTC3P53804 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TTC3P53804 MIR5787-201ENST00000611784 55 ntBASIC24.95■■□□□ 1.58
TTC3P53804 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TTC3P53804 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
TTC3P53804 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.94■■□□□ 1.58
TTC3P53804 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
TTC3P53804 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TTC3P53804 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TTC3P53804 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.94■■□□□ 1.58
TTC3P53804 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TTC3P53804 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.94■■□□□ 1.58
TTC3P53804 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.94■■□□□ 1.58
TTC3P53804 AC011298.3-201ENST00000615796 283 ntBASIC24.94■■□□□ 1.58
TTC3P53804 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
TTC3P53804 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
TTC3P53804 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.93■■□□□ 1.58
TTC3P53804 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.93■■□□□ 1.58
TTC3P53804 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TTC3P53804 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
TTC3P53804 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.93■■□□□ 1.58
TTC3P53804 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.93■■□□□ 1.58
TTC3P53804 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
TTC3P53804 MIR4767-201ENST00000582827 78 ntBASIC24.93■■□□□ 1.58
TTC3P53804 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
TTC3P53804 C17orf82-201ENST00000623772 1530 ntBASIC24.93■■□□□ 1.58
TTC3P53804 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TTC3P53804 RASA4CP-201ENST00000424092 1398 ntBASIC24.92■■□□□ 1.58
TTC3P53804 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TTC3P53804 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.92■■□□□ 1.58
TTC3P53804 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.92■■□□□ 1.58
TTC3P53804 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.92■■□□□ 1.58
TTC3P53804 MIR6089-201ENST00000616698 64 ntBASIC24.92■■□□□ 1.58
TTC3P53804 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TTC3P53804 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.92■■□□□ 1.58
TTC3P53804 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.92■■□□□ 1.58
TTC3P53804 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TTC3P53804 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.91■■□□□ 1.58
TTC3P53804 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC3P53804 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TTC3P53804 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TTC3P53804 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.91■■□□□ 1.58
TTC3P53804 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.91■■□□□ 1.58
TTC3P53804 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC3P53804 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.91■■□□□ 1.58
TTC3P53804 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC3P53804 AC091305.1-201ENST00000479476 895 ntBASIC24.91■■□□□ 1.58
TTC3P53804 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TTC3P53804 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TTC3P53804 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms