Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFC3P40938 MIR6722-201ENST00000617286 78 ntBASIC21.03■□□□□ 0.96
RFC3P40938 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC3P40938 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC3P40938 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.02■□□□□ 0.96
RFC3P40938 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC3P40938 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFC3P40938 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC3P40938 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
RFC3P40938 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.02■□□□□ 0.96
RFC3P40938 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFC3P40938 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RFC3P40938 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC3P40938 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RFC3P40938 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC3P40938 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
RFC3P40938 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFC3P40938 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.01■□□□□ 0.95
RFC3P40938 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC3P40938 AC004448.1-201ENST00000458332 883 ntBASIC21.01■□□□□ 0.95
RFC3P40938 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.01■□□□□ 0.95
RFC3P40938 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC3P40938 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.01■□□□□ 0.95
RFC3P40938 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC3P40938 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFC3P40938 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RFC3P40938 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC3P40938 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFC3P40938 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFC3P40938 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21■□□□□ 0.95
RFC3P40938 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21■□□□□ 0.95
RFC3P40938 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
RFC3P40938 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21■□□□□ 0.95
RFC3P40938 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21■□□□□ 0.95
RFC3P40938 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21■□□□□ 0.95
RFC3P40938 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC3P40938 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC3P40938 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.99■□□□□ 0.95
RFC3P40938 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.99■□□□□ 0.95
RFC3P40938 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC3P40938 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.99■□□□□ 0.95
RFC3P40938 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC3P40938 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFC3P40938 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFC3P40938 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.99■□□□□ 0.95
RFC3P40938 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RFC3P40938 MIR6089-201ENST00000616698 64 ntBASIC20.99■□□□□ 0.95
RFC3P40938 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RFC3P40938 AC131274.2-201ENST00000580697 1507 ntBASIC20.99■□□□□ 0.95
RFC3P40938 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RFC3P40938 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
RFC3P40938 AC096631.2-201ENST00000436136 790 ntBASIC20.98■□□□□ 0.95
RFC3P40938 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.98■□□□□ 0.95
RFC3P40938 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFC3P40938 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFC3P40938 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFC3P40938 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RFC3P40938 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.97■□□□□ 0.95
RFC3P40938 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFC3P40938 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.97■□□□□ 0.95
RFC3P40938 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RFC3P40938 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RFC3P40938 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RFC3P40938 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC3P40938 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RFC3P40938 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.96■□□□□ 0.95
RFC3P40938 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC3P40938 AL139246.5-201ENST00000606645 996 ntBASIC20.96■□□□□ 0.95
RFC3P40938 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFC3P40938 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFC3P40938 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.96■□□□□ 0.95
RFC3P40938 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
RFC3P40938 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFC3P40938 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC3P40938 MIR638-201ENST00000385237 100 ntBASIC20.95■□□□□ 0.94
RFC3P40938 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.95■□□□□ 0.94
RFC3P40938 AC110285.6-201ENST00000617652 491 ntBASIC20.95■□□□□ 0.94
RFC3P40938 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC3P40938 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RFC3P40938 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.95■□□□□ 0.94
RFC3P40938 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC3P40938 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC3P40938 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFC3P40938 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.94■□□□□ 0.94
RFC3P40938 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFC3P40938 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFC3P40938 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.94■□□□□ 0.94
RFC3P40938 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RFC3P40938 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC3P40938 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC3P40938 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC3P40938 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC3P40938 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFC3P40938 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFC3P40938 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFC3P40938 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFC3P40938 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFC3P40938 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFC3P40938 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC3P40938 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms