Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP6V0CP27449 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ATP6V0CP27449 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0CP27449 AC021231.2-201ENST00000594613 730 ntBASIC18.38■□□□□ 0.53
ATP6V0CP27449 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP6V0CP27449 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP6V0CP27449 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0CP27449 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0CP27449 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP6V0CP27449 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP6V0CP27449 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP6V0CP27449 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP6V0CP27449 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP6V0CP27449 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP6V0CP27449 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP6V0CP27449 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP6V0CP27449 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP6V0CP27449 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0CP27449 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0CP27449 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP6V0CP27449 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0CP27449 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0CP27449 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.36■□□□□ 0.53
ATP6V0CP27449 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0CP27449 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0CP27449 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP6V0CP27449 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ATP6V0CP27449 AC092068.2-201ENST00000590491 1708 ntBASIC18.35■□□□□ 0.53
ATP6V0CP27449 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP6V0CP27449 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0CP27449 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0CP27449 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0CP27449 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0CP27449 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0CP27449 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0CP27449 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0CP27449 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V0CP27449 AC087741.3-201ENST00000624270 1347 ntBASIC18.34■□□□□ 0.53
ATP6V0CP27449 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ATP6V0CP27449 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0CP27449 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0CP27449 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0CP27449 FOXO3B-201ENST00000395675 1928 ntBASIC18.33■□□□□ 0.53
ATP6V0CP27449 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ATP6V0CP27449 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0CP27449 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0CP27449 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0CP27449 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6V0CP27449 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0CP27449 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0CP27449 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0CP27449 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0CP27449 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0CP27449 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6V0CP27449 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATP6V0CP27449 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.31■□□□□ 0.52
ATP6V0CP27449 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP6V0CP27449 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
ATP6V0CP27449 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP6V0CP27449 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP6V0CP27449 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP6V0CP27449 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
ATP6V0CP27449 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATP6V0CP27449 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
ATP6V0CP27449 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.3■□□□□ 0.52
ATP6V0CP27449 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.3■□□□□ 0.52
ATP6V0CP27449 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ATP6V0CP27449 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms