Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 AC004812.2-201ENST00000611079 2094 ntBASIC21.35■■□□□ 1.01
SOX30O94993 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX30O94993 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX30O94993 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SOX30O94993 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.35■■□□□ 1.01
SOX30O94993 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX30O94993 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SOX30O94993 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SOX30O94993 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SOX30O94993 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.34■■□□□ 1.01
SOX30O94993 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX30O94993 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SOX30O94993 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SOX30O94993 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SOX30O94993 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX30O94993 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SOX30O94993 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SOX30O94993 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX30O94993 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SOX30O94993 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
SOX30O94993 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.33■■□□□ 1.01
SOX30O94993 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SOX30O94993 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SOX30O94993 MIR4281-201ENST00000580852 62 ntBASIC21.33■■□□□ 1.01
SOX30O94993 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.33■■□□□ 1.01
SOX30O94993 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SOX30O94993 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX30O94993 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX30O94993 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SOX30O94993 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX30O94993 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX30O94993 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX30O94993 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.32■■□□□ 1
SOX30O94993 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SOX30O94993 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.32■■□□□ 1
SOX30O94993 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOX30O94993 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOX30O94993 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.31■■□□□ 1
SOX30O94993 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.31■■□□□ 1
SOX30O94993 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SOX30O94993 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.3■■□□□ 1
SOX30O94993 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.3■■□□□ 1
SOX30O94993 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SOX30O94993 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SOX30O94993 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX30O94993 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
SOX30O94993 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.3■■□□□ 1
SOX30O94993 AC103834.1-201ENST00000520383 144 ntBASIC21.3■■□□□ 1
SOX30O94993 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.3■■□□□ 1
SOX30O94993 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.3■■□□□ 1
SOX30O94993 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SOX30O94993 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX30O94993 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SOX30O94993 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SOX30O94993 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SOX30O94993 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SOX30O94993 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.29■■□□□ 1
SOX30O94993 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.29■■□□□ 1
SOX30O94993 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.29■■□□□ 1
SOX30O94993 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.29■■□□□ 1
SOX30O94993 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOX30O94993 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SOX30O94993 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOX30O94993 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.28■■□□□ 1
SOX30O94993 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOX30O94993 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.28■■□□□ 1
SOX30O94993 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOX30O94993 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOX30O94993 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOX30O94993 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SOX30O94993 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
SOX30O94993 AF131216.4-201ENST00000638924 1588 ntBASIC21.27■■□□□ 1
SOX30O94993 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SOX30O94993 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.27■■□□□ 1
SOX30O94993 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SOX30O94993 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX30O94993 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX30O94993 AC131274.2-201ENST00000580697 1507 ntBASIC21.27■■□□□ 1
SOX30O94993 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX30O94993 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX30O94993 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SOX30O94993 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.27■■□□□ 1
SOX30O94993 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.27■■□□□ 1
SOX30O94993 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SOX30O94993 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
SOX30O94993 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SOX30O94993 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX30O94993 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX30O94993 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SOX30O94993 AC103724.3-201ENST00000564481 992 ntBASIC21.26■□□□□ 0.99
SOX30O94993 AC137630.3-201ENST00000607245 391 ntBASIC21.26■□□□□ 0.99
SOX30O94993 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SOX30O94993 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SOX30O94993 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.26■□□□□ 0.99
SOX30O94993 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.26■□□□□ 0.99
SOX30O94993 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX30O94993 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX30O94993 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
SOX30O94993 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX30O94993 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms