Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AF131216.4-201ENST00000638924 1588 ntBASIC22.5■■□□□ 1.19
KDM1AO60341 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.5■■□□□ 1.19
KDM1AO60341 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KDM1AO60341 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
KDM1AO60341 AL161729.1-201ENST00000604104 1402 ntBASIC22.49■■□□□ 1.19
KDM1AO60341 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.49■■□□□ 1.19
KDM1AO60341 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
KDM1AO60341 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KDM1AO60341 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KDM1AO60341 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KDM1AO60341 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KDM1AO60341 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KDM1AO60341 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.48■■□□□ 1.19
KDM1AO60341 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.48■■□□□ 1.19
KDM1AO60341 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
KDM1AO60341 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
KDM1AO60341 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KDM1AO60341 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KDM1AO60341 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KDM1AO60341 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
KDM1AO60341 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
KDM1AO60341 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
KDM1AO60341 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
KDM1AO60341 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
KDM1AO60341 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
KDM1AO60341 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.46■■□□□ 1.19
KDM1AO60341 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KDM1AO60341 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
KDM1AO60341 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KDM1AO60341 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
KDM1AO60341 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
KDM1AO60341 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.46■■□□□ 1.19
KDM1AO60341 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.46■■□□□ 1.19
KDM1AO60341 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.46■■□□□ 1.19
KDM1AO60341 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
KDM1AO60341 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.46■■□□□ 1.19
KDM1AO60341 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
KDM1AO60341 AL022069.1-201ENST00000568025 1636 ntBASIC22.46■■□□□ 1.19
KDM1AO60341 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
KDM1AO60341 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.45■■□□□ 1.18
KDM1AO60341 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
KDM1AO60341 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KDM1AO60341 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.45■■□□□ 1.18
KDM1AO60341 AC092028.1-203ENST00000608262 953 ntBASIC22.45■■□□□ 1.18
KDM1AO60341 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.45■■□□□ 1.18
KDM1AO60341 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KDM1AO60341 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KDM1AO60341 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
KDM1AO60341 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
KDM1AO60341 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
KDM1AO60341 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
KDM1AO60341 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
KDM1AO60341 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.44■■□□□ 1.18
KDM1AO60341 AC138932.3-201ENST00000567634 1902 ntBASIC22.44■■□□□ 1.18
KDM1AO60341 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.44■■□□□ 1.18
KDM1AO60341 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.43■■□□□ 1.18
KDM1AO60341 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KDM1AO60341 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.43■■□□□ 1.18
KDM1AO60341 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.43■■□□□ 1.18
KDM1AO60341 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KDM1AO60341 GUSBP5-201ENST00000418136 578 ntBASIC22.43■■□□□ 1.18
KDM1AO60341 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.43■■□□□ 1.18
KDM1AO60341 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KDM1AO60341 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.43■■□□□ 1.18
KDM1AO60341 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
KDM1AO60341 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.42■■□□□ 1.18
KDM1AO60341 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KDM1AO60341 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
KDM1AO60341 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KDM1AO60341 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.42■■□□□ 1.18
KDM1AO60341 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM1AO60341 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KDM1AO60341 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
KDM1AO60341 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KDM1AO60341 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
KDM1AO60341 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KDM1AO60341 HLA-L-211ENST00000482052 1765 ntBASIC22.41■■□□□ 1.18
KDM1AO60341 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KDM1AO60341 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
KDM1AO60341 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.41■■□□□ 1.18
KDM1AO60341 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KDM1AO60341 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KDM1AO60341 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KDM1AO60341 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM1AO60341 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM1AO60341 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.4■■□□□ 1.18
KDM1AO60341 MTDHP2-201ENST00000601468 714 ntBASIC22.4■■□□□ 1.18
KDM1AO60341 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM1AO60341 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
KDM1AO60341 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.4■■□□□ 1.18
KDM1AO60341 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.4■■□□□ 1.18
KDM1AO60341 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.39■■□□□ 1.17
KDM1AO60341 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM1AO60341 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
KDM1AO60341 AC004448.1-201ENST00000458332 883 ntBASIC22.39■■□□□ 1.17
KDM1AO60341 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.39■■□□□ 1.17
KDM1AO60341 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.39■■□□□ 1.17
KDM1AO60341 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.39■■□□□ 1.17
KDM1AO60341 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KDM1AO60341 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms