Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.02■□□□□ 0.79
TRBV5-5A0A0J9YX44 AL161729.1-201ENST00000604104 1402 ntBASIC20.02■□□□□ 0.79
TRBV5-5A0A0J9YX44 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRBV5-5A0A0J9YX44 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-5A0A0J9YX44 AC090877.2-201ENST00000558441 1738 ntBASIC20■□□□□ 0.79
TRBV5-5A0A0J9YX44 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-5A0A0J9YX44 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20■□□□□ 0.79
TRBV5-5A0A0J9YX44 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20■□□□□ 0.79
TRBV5-5A0A0J9YX44 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-5A0A0J9YX44 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-5A0A0J9YX44 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV5-5A0A0J9YX44 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 AC233723.2-201ENST00000623798 2106 ntBASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 MIR7108-201ENST00000614319 87 ntBASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV5-5A0A0J9YX44 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-5A0A0J9YX44 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-5A0A0J9YX44 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-5A0A0J9YX44 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-5A0A0J9YX44 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-5A0A0J9YX44 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-5A0A0J9YX44 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-5A0A0J9YX44 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-5A0A0J9YX44 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-5A0A0J9YX44 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-5A0A0J9YX44 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRBV5-5A0A0J9YX44 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-5A0A0J9YX44 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRBV5-5A0A0J9YX44 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-5A0A0J9YX44 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-5A0A0J9YX44 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRBV5-5A0A0J9YX44 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.96■□□□□ 0.79
TRBV5-5A0A0J9YX44 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 AC009831.1-201ENST00000580420 1582 ntBASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.95■□□□□ 0.78
TRBV5-5A0A0J9YX44 CLDN5-201ENST00000403084 2357 ntBASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 RPS2P7-201ENST00000447334 885 ntBASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-5A0A0J9YX44 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-5A0A0J9YX44 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms