Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC30.47■■■□□ 2.47
SPG7Q9UQ90 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
SPG7Q9UQ90 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SPG7Q9UQ90 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC30.46■■■□□ 2.47
SPG7Q9UQ90 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.46■■■□□ 2.47
SPG7Q9UQ90 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SPG7Q9UQ90 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SPG7Q9UQ90 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 REST-206ENST00000612429 1376 ntTSL 5 BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 REST-207ENST00000616975 1370 ntTSL 5 BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
SPG7Q9UQ90 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
SPG7Q9UQ90 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
SPG7Q9UQ90 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC30.44■■■□□ 2.46
SPG7Q9UQ90 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SPG7Q9UQ90 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.44■■■□□ 2.46
SPG7Q9UQ90 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SPG7Q9UQ90 DUX4L19-201ENST00000557448 1267 ntBASIC30.44■■■□□ 2.46
SPG7Q9UQ90 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SPG7Q9UQ90 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SPG7Q9UQ90 AC131274.2-201ENST00000580697 1507 ntBASIC30.43■■■□□ 2.46
SPG7Q9UQ90 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SPG7Q9UQ90 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.43■■■□□ 2.46
SPG7Q9UQ90 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
SPG7Q9UQ90 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SPG7Q9UQ90 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SPG7Q9UQ90 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SPG7Q9UQ90 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SPG7Q9UQ90 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.42■■■□□ 2.46
SPG7Q9UQ90 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SPG7Q9UQ90 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.42■■■□□ 2.46
SPG7Q9UQ90 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.42■■■□□ 2.46
SPG7Q9UQ90 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SPG7Q9UQ90 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.42■■■□□ 2.46
SPG7Q9UQ90 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SPG7Q9UQ90 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.41■■■□□ 2.46
SPG7Q9UQ90 RARRES2P6-201ENST00000567333 442 ntBASIC30.41■■■□□ 2.46
SPG7Q9UQ90 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.41■■■□□ 2.46
SPG7Q9UQ90 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SPG7Q9UQ90 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
SPG7Q9UQ90 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SPG7Q9UQ90 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
SPG7Q9UQ90 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
SPG7Q9UQ90 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SPG7Q9UQ90 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
SPG7Q9UQ90 AL121749.1-202ENST00000609313 2153 ntBASIC30.4■■■□□ 2.46
SPG7Q9UQ90 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SPG7Q9UQ90 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC30.4■■■□□ 2.46
SPG7Q9UQ90 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.4■■■□□ 2.46
SPG7Q9UQ90 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.4■■■□□ 2.46
SPG7Q9UQ90 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.4■■■□□ 2.46
SPG7Q9UQ90 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.4■■■□□ 2.46
SPG7Q9UQ90 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
SPG7Q9UQ90 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SPG7Q9UQ90 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SPG7Q9UQ90 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SPG7Q9UQ90 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
SPG7Q9UQ90 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SPG7Q9UQ90 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SPG7Q9UQ90 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.38■■■□□ 2.45
SPG7Q9UQ90 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.38■■■□□ 2.45
SPG7Q9UQ90 SLC6A10P-202ENST00000431994 2058 ntBASIC30.38■■■□□ 2.45
SPG7Q9UQ90 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SPG7Q9UQ90 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
SPG7Q9UQ90 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.37■■■□□ 2.45
SPG7Q9UQ90 AL136967.2-201ENST00000623968 743 ntBASIC30.37■■■□□ 2.45
SPG7Q9UQ90 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SPG7Q9UQ90 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.36■■■□□ 2.45
SPG7Q9UQ90 AC092171.4-201ENST00000609130 632 ntBASIC30.36■■■□□ 2.45
SPG7Q9UQ90 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.36■■■□□ 2.45
SPG7Q9UQ90 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
SPG7Q9UQ90 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SPG7Q9UQ90 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.35■■■□□ 2.45
SPG7Q9UQ90 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.35■■■□□ 2.45
SPG7Q9UQ90 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
SPG7Q9UQ90 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SPG7Q9UQ90 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.35■■■□□ 2.45
SPG7Q9UQ90 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SPG7Q9UQ90 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SPG7Q9UQ90 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC30.34■■■□□ 2.45
SPG7Q9UQ90 SYT6-210ENST00000641643 1587 ntBASIC30.34■■■□□ 2.45
SPG7Q9UQ90 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
SPG7Q9UQ90 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SPG7Q9UQ90 AF213884.3-201ENST00000563833 479 ntBASIC30.34■■■□□ 2.45
SPG7Q9UQ90 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms