Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.45■■□□□ 1.18
LRIT1Q9P2V4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRIT1Q9P2V4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.44■■□□□ 1.18
LRIT1Q9P2V4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRIT1Q9P2V4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRIT1Q9P2V4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRIT1Q9P2V4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRIT1Q9P2V4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRIT1Q9P2V4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LRIT1Q9P2V4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.43■■□□□ 1.18
LRIT1Q9P2V4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.43■■□□□ 1.18
LRIT1Q9P2V4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.43■■□□□ 1.18
LRIT1Q9P2V4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRIT1Q9P2V4 AC145676.1-201ENST00000514988 2004 ntBASIC22.42■■□□□ 1.18
LRIT1Q9P2V4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRIT1Q9P2V4 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.42■■□□□ 1.18
LRIT1Q9P2V4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRIT1Q9P2V4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRIT1Q9P2V4 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.41■■□□□ 1.18
LRIT1Q9P2V4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRIT1Q9P2V4 MIR935-201ENST00000401179 91 ntBASIC22.41■■□□□ 1.18
LRIT1Q9P2V4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
LRIT1Q9P2V4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.41■■□□□ 1.18
LRIT1Q9P2V4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LRIT1Q9P2V4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.39■■□□□ 1.18
LRIT1Q9P2V4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
LRIT1Q9P2V4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
LRIT1Q9P2V4 AC005703.6-201ENST00000623265 1329 ntBASIC22.39■■□□□ 1.18
LRIT1Q9P2V4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LRIT1Q9P2V4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.39■■□□□ 1.17
LRIT1Q9P2V4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.39■■□□□ 1.17
LRIT1Q9P2V4 AC005837.3-201ENST00000612163 286 ntBASIC22.39■■□□□ 1.17
LRIT1Q9P2V4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
LRIT1Q9P2V4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.39■■□□□ 1.17
LRIT1Q9P2V4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LRIT1Q9P2V4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.39■■□□□ 1.17
LRIT1Q9P2V4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.39■■□□□ 1.17
LRIT1Q9P2V4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LRIT1Q9P2V4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LRIT1Q9P2V4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LRIT1Q9P2V4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.38■■□□□ 1.17
LRIT1Q9P2V4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.38■■□□□ 1.17
LRIT1Q9P2V4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LRIT1Q9P2V4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LRIT1Q9P2V4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.38■■□□□ 1.17
LRIT1Q9P2V4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.38■■□□□ 1.17
LRIT1Q9P2V4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRIT1Q9P2V4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.37■■□□□ 1.17
LRIT1Q9P2V4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.37■■□□□ 1.17
LRIT1Q9P2V4 MIR6089-201ENST00000616698 64 ntBASIC22.37■■□□□ 1.17
LRIT1Q9P2V4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 SRD5A1P1-201ENST00000442297 786 ntBASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 AC133561.4-201ENST00000566112 224 ntBASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 AC131274.2-201ENST00000580697 1507 ntBASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LRIT1Q9P2V4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRIT1Q9P2V4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
LRIT1Q9P2V4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRIT1Q9P2V4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
LRIT1Q9P2V4 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.35■■□□□ 1.17
LRIT1Q9P2V4 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.35■■□□□ 1.17
LRIT1Q9P2V4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRIT1Q9P2V4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 PBX2P1-201ENST00000493219 1291 ntBASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
LRIT1Q9P2V4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRIT1Q9P2V4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.33■■□□□ 1.17
LRIT1Q9P2V4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRIT1Q9P2V4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.33■■□□□ 1.17
LRIT1Q9P2V4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRIT1Q9P2V4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
LRIT1Q9P2V4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
LRIT1Q9P2V4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRIT1Q9P2V4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms