Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.38■■□□□ 1.49
CSNK1G1Q9HCP0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSNK1G1Q9HCP0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CSNK1G1Q9HCP0 MIR6722-201ENST00000617286 78 ntBASIC24.37■■□□□ 1.49
CSNK1G1Q9HCP0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.37■■□□□ 1.49
CSNK1G1Q9HCP0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CSNK1G1Q9HCP0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.37■■□□□ 1.49
CSNK1G1Q9HCP0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.37■■□□□ 1.49
CSNK1G1Q9HCP0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSNK1G1Q9HCP0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSNK1G1Q9HCP0 MTDHP2-201ENST00000601468 714 ntBASIC24.36■■□□□ 1.49
CSNK1G1Q9HCP0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.36■■□□□ 1.49
CSNK1G1Q9HCP0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CSNK1G1Q9HCP0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CSNK1G1Q9HCP0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.35■■□□□ 1.49
CSNK1G1Q9HCP0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.35■■□□□ 1.49
CSNK1G1Q9HCP0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.35■■□□□ 1.49
CSNK1G1Q9HCP0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CSNK1G1Q9HCP0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CSNK1G1Q9HCP0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CSNK1G1Q9HCP0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.34■■□□□ 1.49
CSNK1G1Q9HCP0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.34■■□□□ 1.49
CSNK1G1Q9HCP0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.34■■□□□ 1.49
CSNK1G1Q9HCP0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.34■■□□□ 1.49
CSNK1G1Q9HCP0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.34■■□□□ 1.49
CSNK1G1Q9HCP0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G1Q9HCP0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G1Q9HCP0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G1Q9HCP0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G1Q9HCP0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G1Q9HCP0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.33■■□□□ 1.49
CSNK1G1Q9HCP0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CSNK1G1Q9HCP0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.33■■□□□ 1.49
CSNK1G1Q9HCP0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.33■■□□□ 1.49
CSNK1G1Q9HCP0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.48
CSNK1G1Q9HCP0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 AL022069.1-201ENST00000568025 1636 ntBASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 MIR6724-1-201ENST00000616420 92 ntBASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 MIR6724-2-201ENST00000616483 92 ntBASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 MIR6724-4-201ENST00000617390 92 ntBASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 MIR6724-3-201ENST00000622482 92 ntBASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CSNK1G1Q9HCP0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CSNK1G1Q9HCP0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CSNK1G1Q9HCP0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.31■■□□□ 1.48
CSNK1G1Q9HCP0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CSNK1G1Q9HCP0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CSNK1G1Q9HCP0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.31■■□□□ 1.48
CSNK1G1Q9HCP0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CSNK1G1Q9HCP0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CSNK1G1Q9HCP0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.3■■□□□ 1.48
CSNK1G1Q9HCP0 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.3■■□□□ 1.48
CSNK1G1Q9HCP0 AL161729.1-201ENST00000604104 1402 ntBASIC24.3■■□□□ 1.48
CSNK1G1Q9HCP0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.3■■□□□ 1.48
CSNK1G1Q9HCP0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.3■■□□□ 1.48
CSNK1G1Q9HCP0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CSNK1G1Q9HCP0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
CSNK1G1Q9HCP0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 AC131212.1-201ENST00000613771 668 ntBASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
CSNK1G1Q9HCP0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CSNK1G1Q9HCP0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.26■■□□□ 1.47
CSNK1G1Q9HCP0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.25■■□□□ 1.47
CSNK1G1Q9HCP0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms