Protein–RNA interactions for Protein: Q9H322

VCX2, Variable charge X-linked protein 2, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX2Q9H322 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCX2Q9H322 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCX2Q9H322 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCX2Q9H322 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCX2Q9H322 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.28■□□□□ 0.2
VCX2Q9H322 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCX2Q9H322 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCX2Q9H322 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VCX2Q9H322 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCX2Q9H322 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VCX2Q9H322 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 CHST11-203ENST00000547956 936 ntTSL 2 BASIC16.27■□□□□ 0.2
VCX2Q9H322 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
VCX2Q9H322 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.27■□□□□ 0.19
VCX2Q9H322 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCX2Q9H322 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCX2Q9H322 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCX2Q9H322 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCX2Q9H322 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VCX2Q9H322 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
VCX2Q9H322 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCX2Q9H322 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCX2Q9H322 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
VCX2Q9H322 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
VCX2Q9H322 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.26■□□□□ 0.19
VCX2Q9H322 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC16.26■□□□□ 0.19
VCX2Q9H322 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.25■□□□□ 0.19
VCX2Q9H322 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
VCX2Q9H322 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCX2Q9H322 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCX2Q9H322 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
VCX2Q9H322 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.25■□□□□ 0.19
VCX2Q9H322 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VCX2Q9H322 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.25■□□□□ 0.19
VCX2Q9H322 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
VCX2Q9H322 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCX2Q9H322 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.25■□□□□ 0.19
VCX2Q9H322 AC126177.7-201ENST00000547904 679 ntBASIC16.25■□□□□ 0.19
VCX2Q9H322 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCX2Q9H322 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VCX2Q9H322 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCX2Q9H322 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VCX2Q9H322 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.25■□□□□ 0.19
VCX2Q9H322 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
VCX2Q9H322 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
VCX2Q9H322 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCX2Q9H322 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCX2Q9H322 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCX2Q9H322 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCX2Q9H322 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCX2Q9H322 DUX4L13-201ENST00000554103 1267 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 DUX4L15-201ENST00000611059 1267 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.24■□□□□ 0.19
VCX2Q9H322 DUX4L23-201ENST00000615195 1269 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 DUX4L24-201ENST00000617576 1269 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 LINC01971-201ENST00000617888 1048 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 DUX4L22-201ENST00000618238 1269 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 DUX4L20-201ENST00000619712 1269 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 DUX4L21-201ENST00000622058 1269 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 DUX4L10-201ENST00000622460 1267 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 DUX4L25-201ENST00000624915 1269 ntBASIC16.24■□□□□ 0.19
VCX2Q9H322 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCX2Q9H322 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.24■□□□□ 0.19
VCX2Q9H322 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VCX2Q9H322 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.24■□□□□ 0.19
VCX2Q9H322 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCX2Q9H322 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.24■□□□□ 0.19
VCX2Q9H322 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VCX2Q9H322 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
VCX2Q9H322 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VCX2Q9H322 C9orf163-202ENST00000624034 2573 ntBASIC16.23■□□□□ 0.19
VCX2Q9H322 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCX2Q9H322 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
VCX2Q9H322 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC16.23■□□□□ 0.19
VCX2Q9H322 MIR6089-201ENST00000616698 64 ntBASIC16.23■□□□□ 0.19
VCX2Q9H322 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCX2Q9H322 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VCX2Q9H322 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCX2Q9H322 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCX2Q9H322 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCX2Q9H322 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VCX2Q9H322 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
VCX2Q9H322 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCX2Q9H322 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC16.22■□□□□ 0.19
VCX2Q9H322 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCX2Q9H322 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCX2Q9H322 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCX2Q9H322 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCX2Q9H322 AL162393.1-201ENST00000437852 946 ntBASIC16.22■□□□□ 0.19
VCX2Q9H322 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VCX2Q9H322 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VCX2Q9H322 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms