Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC29.74■■■□□ 2.35
LINC00116Q8NCU8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
LINC00116Q8NCU8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LINC00116Q8NCU8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
LINC00116Q8NCU8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
LINC00116Q8NCU8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
LINC00116Q8NCU8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC29.72■■■□□ 2.35
LINC00116Q8NCU8 AC099791.2-201ENST00000605725 427 ntBASIC29.72■■■□□ 2.35
LINC00116Q8NCU8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
LINC00116Q8NCU8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
LINC00116Q8NCU8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
LINC00116Q8NCU8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
LINC00116Q8NCU8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
LINC00116Q8NCU8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC29.72■■■□□ 2.35
LINC00116Q8NCU8 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.71■■■□□ 2.35
LINC00116Q8NCU8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.71■■■□□ 2.35
LINC00116Q8NCU8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.71■■■□□ 2.35
LINC00116Q8NCU8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.71■■■□□ 2.35
LINC00116Q8NCU8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
LINC00116Q8NCU8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
LINC00116Q8NCU8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
LINC00116Q8NCU8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
LINC00116Q8NCU8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
LINC00116Q8NCU8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC29.7■■■□□ 2.35
LINC00116Q8NCU8 AC027682.1-201ENST00000562846 899 ntBASIC29.7■■■□□ 2.35
LINC00116Q8NCU8 REST-206ENST00000612429 1376 ntTSL 5 BASIC29.69■■■□□ 2.34
LINC00116Q8NCU8 REST-207ENST00000616975 1370 ntTSL 5 BASIC29.69■■■□□ 2.34
LINC00116Q8NCU8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
LINC00116Q8NCU8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.69■■■□□ 2.34
LINC00116Q8NCU8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.69■■■□□ 2.34
LINC00116Q8NCU8 AC092171.4-201ENST00000609130 632 ntBASIC29.69■■■□□ 2.34
LINC00116Q8NCU8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
LINC00116Q8NCU8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.69■■■□□ 2.34
LINC00116Q8NCU8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LINC00116Q8NCU8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LINC00116Q8NCU8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
LINC00116Q8NCU8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC29.68■■■□□ 2.34
LINC00116Q8NCU8 AC008764.7-201ENST00000593779 1081 ntBASIC29.68■■■□□ 2.34
LINC00116Q8NCU8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.68■■■□□ 2.34
LINC00116Q8NCU8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
LINC00116Q8NCU8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
LINC00116Q8NCU8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.67■■■□□ 2.34
LINC00116Q8NCU8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
LINC00116Q8NCU8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 AC131274.2-201ENST00000580697 1507 ntBASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
LINC00116Q8NCU8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LINC00116Q8NCU8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LINC00116Q8NCU8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.65■■■□□ 2.34
LINC00116Q8NCU8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC29.65■■■□□ 2.34
LINC00116Q8NCU8 AC011298.3-201ENST00000615796 283 ntBASIC29.65■■■□□ 2.34
LINC00116Q8NCU8 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
LINC00116Q8NCU8 IRS3P-201ENST00000223076 1006 ntBASIC29.64■■■□□ 2.34
LINC00116Q8NCU8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
LINC00116Q8NCU8 AC099791.1-201ENST00000416440 715 ntBASIC29.64■■■□□ 2.34
LINC00116Q8NCU8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.64■■■□□ 2.34
LINC00116Q8NCU8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.64■■■□□ 2.34
LINC00116Q8NCU8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
LINC00116Q8NCU8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC29.63■■■□□ 2.33
LINC00116Q8NCU8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.63■■■□□ 2.33
LINC00116Q8NCU8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.63■■■□□ 2.33
LINC00116Q8NCU8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
LINC00116Q8NCU8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
LINC00116Q8NCU8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
LINC00116Q8NCU8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
LINC00116Q8NCU8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC29.62■■■□□ 2.33
LINC00116Q8NCU8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC29.62■■■□□ 2.33
LINC00116Q8NCU8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.62■■■□□ 2.33
LINC00116Q8NCU8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
LINC00116Q8NCU8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
LINC00116Q8NCU8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
LINC00116Q8NCU8 AL138724.1-201ENST00000606771 1088 ntBASIC29.61■■■□□ 2.33
LINC00116Q8NCU8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.61■■■□□ 2.33
LINC00116Q8NCU8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.61■■■□□ 2.33
LINC00116Q8NCU8 AC009102.2-201ENST00000606772 1639 ntBASIC29.6■■■□□ 2.33
LINC00116Q8NCU8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC29.6■■■□□ 2.33
LINC00116Q8NCU8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LINC00116Q8NCU8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LINC00116Q8NCU8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LINC00116Q8NCU8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
LINC00116Q8NCU8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
LINC00116Q8NCU8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
LINC00116Q8NCU8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
LINC00116Q8NCU8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms