Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC33.07■■■□□ 2.88
LTBP4Q8N2S1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC33.07■■■□□ 2.88
LTBP4Q8N2S1 LBH-205ENST00000407930 756 ntTSL 2 BASIC33.06■■■□□ 2.88
LTBP4Q8N2S1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
LTBP4Q8N2S1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC33.06■■■□□ 2.88
LTBP4Q8N2S1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
LTBP4Q8N2S1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
LTBP4Q8N2S1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
LTBP4Q8N2S1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
LTBP4Q8N2S1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
LTBP4Q8N2S1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 KRT18P14-201ENST00000534205 1250 ntBASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 AL358852.1-201ENST00000623174 1268 ntBASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
LTBP4Q8N2S1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
LTBP4Q8N2S1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC33.03■■■□□ 2.88
LTBP4Q8N2S1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC33.03■■■□□ 2.88
LTBP4Q8N2S1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC33.03■■■□□ 2.88
LTBP4Q8N2S1 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
LTBP4Q8N2S1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
LTBP4Q8N2S1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC33.02■■■□□ 2.88
LTBP4Q8N2S1 AC006015.1-201ENST00000429970 570 ntBASIC33.02■■■□□ 2.88
LTBP4Q8N2S1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
LTBP4Q8N2S1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
LTBP4Q8N2S1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
LTBP4Q8N2S1 MAP2K4P1-201ENST00000438453 1195 ntBASIC33.02■■■□□ 2.88
LTBP4Q8N2S1 TERF1P2-201ENST00000583350 1212 ntBASIC33.02■■■□□ 2.88
LTBP4Q8N2S1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
LTBP4Q8N2S1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC33.01■■■□□ 2.87
LTBP4Q8N2S1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC33.01■■■□□ 2.87
LTBP4Q8N2S1 AC005703.6-201ENST00000623265 1329 ntBASIC33.01■■■□□ 2.87
LTBP4Q8N2S1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
LTBP4Q8N2S1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC33.01■■■□□ 2.87
LTBP4Q8N2S1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
LTBP4Q8N2S1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC33.01■■■□□ 2.87
LTBP4Q8N2S1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC33■■■□□ 2.87
LTBP4Q8N2S1 PPP1R14BP3-201ENST00000509033 445 ntBASIC33■■■□□ 2.87
LTBP4Q8N2S1 BX255925.1-201ENST00000566954 1854 ntBASIC33■■■□□ 2.87
LTBP4Q8N2S1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 MIR6084-201ENST00000622012 110 ntBASIC32.99■■■□□ 2.87
LTBP4Q8N2S1 AC012414.1-201ENST00000556676 535 ntBASIC32.98■■■□□ 2.87
LTBP4Q8N2S1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC32.97■■■□□ 2.87
LTBP4Q8N2S1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
LTBP4Q8N2S1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC32.97■■■□□ 2.87
LTBP4Q8N2S1 AL499627.2-201ENST00000606283 725 ntBASIC32.97■■■□□ 2.87
LTBP4Q8N2S1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
LTBP4Q8N2S1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC32.97■■■□□ 2.87
LTBP4Q8N2S1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.97■■■□□ 2.87
LTBP4Q8N2S1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
LTBP4Q8N2S1 TSPY26P-201ENST00000476365 1326 ntBASIC32.96■■■□□ 2.87
LTBP4Q8N2S1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.96■■■□□ 2.87
LTBP4Q8N2S1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
LTBP4Q8N2S1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC32.96■■■□□ 2.87
LTBP4Q8N2S1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
LTBP4Q8N2S1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
LTBP4Q8N2S1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC32.95■■■□□ 2.87
LTBP4Q8N2S1 TSPY20P-201ENST00000450910 630 ntBASIC32.95■■■□□ 2.87
LTBP4Q8N2S1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC32.95■■■□□ 2.87
LTBP4Q8N2S1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC32.95■■■□□ 2.87
LTBP4Q8N2S1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
LTBP4Q8N2S1 CD99P1-205ENST00000527459 561 ntBASIC32.95■■■□□ 2.86
LTBP4Q8N2S1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC32.94■■■□□ 2.86
LTBP4Q8N2S1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
LTBP4Q8N2S1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
LTBP4Q8N2S1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
LTBP4Q8N2S1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
LTBP4Q8N2S1 AC093827.2-201ENST00000512654 315 ntBASIC32.93■■■□□ 2.86
LTBP4Q8N2S1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
LTBP4Q8N2S1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
LTBP4Q8N2S1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC32.91■■■□□ 2.86
LTBP4Q8N2S1 AC026185.1-201ENST00000445748 174 ntBASIC32.91■■■□□ 2.86
LTBP4Q8N2S1 AL109923.1-201ENST00000618799 583 ntBASIC32.91■■■□□ 2.86
LTBP4Q8N2S1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
LTBP4Q8N2S1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
LTBP4Q8N2S1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
LTBP4Q8N2S1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC32.91■■■□□ 2.86
LTBP4Q8N2S1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms