Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.09■■□□□ 1.13
CARFQ8N187 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CARFQ8N187 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
CARFQ8N187 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CARFQ8N187 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.08■■□□□ 1.13
CARFQ8N187 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CARFQ8N187 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
CARFQ8N187 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CARFQ8N187 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CARFQ8N187 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CARFQ8N187 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CARFQ8N187 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CARFQ8N187 AL512631.2-201ENST00000604634 923 ntBASIC22.07■■□□□ 1.12
CARFQ8N187 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CARFQ8N187 AP003733.4-201ENST00000623785 1697 ntBASIC22.07■■□□□ 1.12
CARFQ8N187 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.06■■□□□ 1.12
CARFQ8N187 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CARFQ8N187 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CARFQ8N187 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CARFQ8N187 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.06■■□□□ 1.12
CARFQ8N187 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.06■■□□□ 1.12
CARFQ8N187 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.06■■□□□ 1.12
CARFQ8N187 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.06■■□□□ 1.12
CARFQ8N187 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CARFQ8N187 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.06■■□□□ 1.12
CARFQ8N187 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CARFQ8N187 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CARFQ8N187 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CARFQ8N187 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CARFQ8N187 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.05■■□□□ 1.12
CARFQ8N187 AL136116.3-201ENST00000402907 1138 ntBASIC22.05■■□□□ 1.12
CARFQ8N187 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CARFQ8N187 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.05■■□□□ 1.12
CARFQ8N187 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CARFQ8N187 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CARFQ8N187 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CARFQ8N187 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CARFQ8N187 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CARFQ8N187 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.04■■□□□ 1.12
CARFQ8N187 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
CARFQ8N187 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CARFQ8N187 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.04■■□□□ 1.12
CARFQ8N187 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.04■■□□□ 1.12
CARFQ8N187 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.04■■□□□ 1.12
CARFQ8N187 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CARFQ8N187 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CARFQ8N187 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CARFQ8N187 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CARFQ8N187 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CARFQ8N187 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CARFQ8N187 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CARFQ8N187 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CARFQ8N187 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.03■■□□□ 1.12
CARFQ8N187 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.03■■□□□ 1.12
CARFQ8N187 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CARFQ8N187 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CARFQ8N187 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CARFQ8N187 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CARFQ8N187 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CARFQ8N187 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CARFQ8N187 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CARFQ8N187 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.02■■□□□ 1.12
CARFQ8N187 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CARFQ8N187 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CARFQ8N187 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CARFQ8N187 MIR4466-201ENST00000606121 54 ntBASIC22.01■■□□□ 1.11
CARFQ8N187 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.01■■□□□ 1.11
CARFQ8N187 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.01■■□□□ 1.11
CARFQ8N187 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CARFQ8N187 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22■■□□□ 1.11
CARFQ8N187 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22■■□□□ 1.11
CARFQ8N187 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22■■□□□ 1.11
CARFQ8N187 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22■■□□□ 1.11
CARFQ8N187 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22■■□□□ 1.11
CARFQ8N187 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.99■■□□□ 1.11
CARFQ8N187 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CARFQ8N187 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CARFQ8N187 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CARFQ8N187 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CARFQ8N187 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.99■■□□□ 1.11
CARFQ8N187 AC022211.4-201ENST00000625094 2161 ntBASIC21.99■■□□□ 1.11
CARFQ8N187 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CARFQ8N187 HLA-L-211ENST00000482052 1765 ntBASIC21.99■■□□□ 1.11
CARFQ8N187 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CARFQ8N187 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CARFQ8N187 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CARFQ8N187 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.98■■□□□ 1.11
CARFQ8N187 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CARFQ8N187 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CARFQ8N187 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.98■■□□□ 1.11
CARFQ8N187 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.98■■□□□ 1.11
CARFQ8N187 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.98■■□□□ 1.11
CARFQ8N187 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CARFQ8N187 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CARFQ8N187 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CARFQ8N187 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CARFQ8N187 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CARFQ8N187 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CARFQ8N187 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CARFQ8N187 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms