Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
VRK2Q86Y07 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VRK2Q86Y07 AC139795.1-202ENST00000500444 432 ntBASIC21.34■■□□□ 1.01
VRK2Q86Y07 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRK2Q86Y07 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VRK2Q86Y07 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VRK2Q86Y07 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VRK2Q86Y07 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.33■■□□□ 1.01
VRK2Q86Y07 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
VRK2Q86Y07 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VRK2Q86Y07 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.33■■□□□ 1
VRK2Q86Y07 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.32■■□□□ 1
VRK2Q86Y07 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 AC004987.1-201ENST00000428627 508 ntBASIC21.32■■□□□ 1
VRK2Q86Y07 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.32■■□□□ 1
VRK2Q86Y07 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VRK2Q86Y07 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
VRK2Q86Y07 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.31■■□□□ 1
VRK2Q86Y07 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.31■■□□□ 1
VRK2Q86Y07 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.31■■□□□ 1
VRK2Q86Y07 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.31■■□□□ 1
VRK2Q86Y07 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
VRK2Q86Y07 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
VRK2Q86Y07 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.3■■□□□ 1
VRK2Q86Y07 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.3■■□□□ 1
VRK2Q86Y07 ATP5G2P3-201ENST00000429083 425 ntBASIC21.3■■□□□ 1
VRK2Q86Y07 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VRK2Q86Y07 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.3■■□□□ 1
VRK2Q86Y07 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VRK2Q86Y07 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.3■■□□□ 1
VRK2Q86Y07 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.3■■□□□ 1
VRK2Q86Y07 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
VRK2Q86Y07 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VRK2Q86Y07 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 BHLHE23-202ENST00000612929 1109 ntBASIC21.29■■□□□ 1
VRK2Q86Y07 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.29■■□□□ 1
VRK2Q86Y07 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.29■■□□□ 1
VRK2Q86Y07 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
VRK2Q86Y07 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.28■■□□□ 1
VRK2Q86Y07 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VRK2Q86Y07 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
VRK2Q86Y07 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.28■■□□□ 1
VRK2Q86Y07 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
VRK2Q86Y07 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VRK2Q86Y07 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VRK2Q86Y07 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.27■■□□□ 1
VRK2Q86Y07 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
VRK2Q86Y07 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRK2Q86Y07 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRK2Q86Y07 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.27■■□□□ 1
VRK2Q86Y07 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
VRK2Q86Y07 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.27■■□□□ 1
VRK2Q86Y07 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.27■■□□□ 1
VRK2Q86Y07 AC019171.1-201ENST00000601251 1056 ntBASIC21.27■■□□□ 1
VRK2Q86Y07 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VRK2Q86Y07 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
VRK2Q86Y07 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.27■■□□□ 1
VRK2Q86Y07 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VRK2Q86Y07 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
VRK2Q86Y07 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
VRK2Q86Y07 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VRK2Q86Y07 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VRK2Q86Y07 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.26■□□□□ 0.99
VRK2Q86Y07 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
VRK2Q86Y07 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
VRK2Q86Y07 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
VRK2Q86Y07 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
VRK2Q86Y07 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
VRK2Q86Y07 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.25■□□□□ 0.99
VRK2Q86Y07 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms