Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRTM1Q86UE6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 AL117328.2-201ENST00000624617 1940 ntBASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRTM1Q86UE6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM1Q86UE6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM1Q86UE6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM1Q86UE6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRTM1Q86UE6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRTM1Q86UE6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRTM1Q86UE6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.02■□□□□ 0.79
LRRTM1Q86UE6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
LRRTM1Q86UE6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRTM1Q86UE6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRTM1Q86UE6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.01■□□□□ 0.79
LRRTM1Q86UE6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRTM1Q86UE6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRTM1Q86UE6 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRTM1Q86UE6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRTM1Q86UE6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRTM1Q86UE6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20■□□□□ 0.79
LRRTM1Q86UE6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20■□□□□ 0.79
LRRTM1Q86UE6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20■□□□□ 0.79
LRRTM1Q86UE6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20■□□□□ 0.79
LRRTM1Q86UE6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRTM1Q86UE6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 CLDN5-201ENST00000403084 2357 ntBASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 ANOS2P-203ENST00000472227 1816 ntBASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LRRTM1Q86UE6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRTM1Q86UE6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 KRT18P10-201ENST00000388836 1287 ntBASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 RAP2CP1-202ENST00000605179 643 ntBASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRTM1Q86UE6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms