Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC30Q5VVM6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC29.67■■■□□ 2.34
CCDC30Q5VVM6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC30Q5VVM6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC30Q5VVM6 AC004448.1-201ENST00000458332 883 ntBASIC29.66■■■□□ 2.34
CCDC30Q5VVM6 HLA-L-211ENST00000482052 1765 ntBASIC29.66■■■□□ 2.34
CCDC30Q5VVM6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.66■■■□□ 2.34
CCDC30Q5VVM6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC30Q5VVM6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC30Q5VVM6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC30Q5VVM6 MED17-227ENST00000640521 2047 ntTSL 5 BASIC29.66■■■□□ 2.34
CCDC30Q5VVM6 AC131274.2-201ENST00000580697 1507 ntBASIC29.66■■■□□ 2.34
CCDC30Q5VVM6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC29.65■■■□□ 2.34
CCDC30Q5VVM6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC29.65■■■□□ 2.34
CCDC30Q5VVM6 AC138932.3-201ENST00000567634 1902 ntBASIC29.65■■■□□ 2.34
CCDC30Q5VVM6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC30Q5VVM6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC29.64■■■□□ 2.34
CCDC30Q5VVM6 MIR6722-201ENST00000617286 78 ntBASIC29.64■■■□□ 2.34
CCDC30Q5VVM6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
CCDC30Q5VVM6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.63■■■□□ 2.33
CCDC30Q5VVM6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC30Q5VVM6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC29.63■■■□□ 2.33
CCDC30Q5VVM6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC29.63■■■□□ 2.33
CCDC30Q5VVM6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC30Q5VVM6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC29.63■■■□□ 2.33
CCDC30Q5VVM6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC30Q5VVM6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC30Q5VVM6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.62■■■□□ 2.33
CCDC30Q5VVM6 MIR6724-1-201ENST00000616420 92 ntBASIC29.62■■■□□ 2.33
CCDC30Q5VVM6 MIR6724-2-201ENST00000616483 92 ntBASIC29.62■■■□□ 2.33
CCDC30Q5VVM6 MIR6724-4-201ENST00000617390 92 ntBASIC29.62■■■□□ 2.33
CCDC30Q5VVM6 MIR6724-3-201ENST00000622482 92 ntBASIC29.62■■■□□ 2.33
CCDC30Q5VVM6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.62■■■□□ 2.33
CCDC30Q5VVM6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC30Q5VVM6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.61■■■□□ 2.33
CCDC30Q5VVM6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC30Q5VVM6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
CCDC30Q5VVM6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC29.61■■■□□ 2.33
CCDC30Q5VVM6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC30Q5VVM6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC30Q5VVM6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC30Q5VVM6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC30Q5VVM6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC30Q5VVM6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC29.6■■■□□ 2.33
CCDC30Q5VVM6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.6■■■□□ 2.33
CCDC30Q5VVM6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC29.6■■■□□ 2.33
CCDC30Q5VVM6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC30Q5VVM6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC30Q5VVM6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
CCDC30Q5VVM6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.59■■■□□ 2.33
CCDC30Q5VVM6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC29.59■■■□□ 2.33
CCDC30Q5VVM6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
CCDC30Q5VVM6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.59■■■□□ 2.33
CCDC30Q5VVM6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.59■■■□□ 2.33
CCDC30Q5VVM6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC30Q5VVM6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CCDC30Q5VVM6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC30Q5VVM6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC30Q5VVM6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC30Q5VVM6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.58■■■□□ 2.33
CCDC30Q5VVM6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC30Q5VVM6 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC30Q5VVM6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC30Q5VVM6 AL022069.1-201ENST00000568025 1636 ntBASIC29.58■■■□□ 2.33
CCDC30Q5VVM6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.58■■■□□ 2.33
CCDC30Q5VVM6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC30Q5VVM6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC30Q5VVM6 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.57■■■□□ 2.32
CCDC30Q5VVM6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CCDC30Q5VVM6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.56■■■□□ 2.32
CCDC30Q5VVM6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.56■■■□□ 2.32
CCDC30Q5VVM6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CCDC30Q5VVM6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC29.56■■■□□ 2.32
CCDC30Q5VVM6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC29.55■■■□□ 2.32
CCDC30Q5VVM6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.55■■■□□ 2.32
CCDC30Q5VVM6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
CCDC30Q5VVM6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC29.54■■■□□ 2.32
CCDC30Q5VVM6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.54■■■□□ 2.32
CCDC30Q5VVM6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.54■■■□□ 2.32
CCDC30Q5VVM6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
CCDC30Q5VVM6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC30Q5VVM6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
CCDC30Q5VVM6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
CCDC30Q5VVM6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC30Q5VVM6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC30Q5VVM6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC30Q5VVM6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC30Q5VVM6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
CCDC30Q5VVM6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCDC30Q5VVM6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCDC30Q5VVM6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCDC30Q5VVM6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.52■■■□□ 2.32
CCDC30Q5VVM6 AL117332.1-201ENST00000622628 974 ntBASIC29.52■■■□□ 2.32
CCDC30Q5VVM6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCDC30Q5VVM6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
CCDC30Q5VVM6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCDC30Q5VVM6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
CCDC30Q5VVM6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
CCDC30Q5VVM6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.51■■■□□ 2.31
CCDC30Q5VVM6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.51■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms