Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC35.59■■■■□ 3.29
CDC42BPAQ5VT25 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC35.58■■■■□ 3.29
CDC42BPAQ5VT25 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC35.58■■■■□ 3.29
CDC42BPAQ5VT25 PTCHD3P2-201ENST00000424937 1205 ntBASIC35.58■■■■□ 3.29
CDC42BPAQ5VT25 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CDC42BPAQ5VT25 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
CDC42BPAQ5VT25 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CDC42BPAQ5VT25 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC35.57■■■■□ 3.29
CDC42BPAQ5VT25 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC35.57■■■■□ 3.29
CDC42BPAQ5VT25 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC35.57■■■■□ 3.28
CDC42BPAQ5VT25 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
CDC42BPAQ5VT25 AL136967.2-201ENST00000623968 743 ntBASIC35.57■■■■□ 3.28
CDC42BPAQ5VT25 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 MIR6089-201ENST00000616698 64 ntBASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 AL355001.2-201ENST00000620617 1191 ntBASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC35.56■■■■□ 3.28
CDC42BPAQ5VT25 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CDC42BPAQ5VT25 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CDC42BPAQ5VT25 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CDC42BPAQ5VT25 AC104564.3-201ENST00000582367 638 ntBASIC35.55■■■■□ 3.28
CDC42BPAQ5VT25 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CDC42BPAQ5VT25 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CDC42BPAQ5VT25 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC35.54■■■■□ 3.28
CDC42BPAQ5VT25 AC092803.2-201ENST00000564287 1899 ntBASIC35.54■■■■□ 3.28
CDC42BPAQ5VT25 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CDC42BPAQ5VT25 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
CDC42BPAQ5VT25 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
CDC42BPAQ5VT25 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
CDC42BPAQ5VT25 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC35.54■■■■□ 3.28
CDC42BPAQ5VT25 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC35.53■■■■□ 3.28
CDC42BPAQ5VT25 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC35.53■■■■□ 3.28
CDC42BPAQ5VT25 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC35.53■■■■□ 3.28
CDC42BPAQ5VT25 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CDC42BPAQ5VT25 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.52■■■■□ 3.28
CDC42BPAQ5VT25 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC35.52■■■■□ 3.28
CDC42BPAQ5VT25 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CDC42BPAQ5VT25 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC35.52■■■■□ 3.28
CDC42BPAQ5VT25 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC35.52■■■■□ 3.28
CDC42BPAQ5VT25 DUX4L19-201ENST00000557448 1267 ntBASIC35.52■■■■□ 3.28
CDC42BPAQ5VT25 MIR4767-201ENST00000582827 78 ntBASIC35.52■■■■□ 3.28
CDC42BPAQ5VT25 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC35.52■■■■□ 3.28
CDC42BPAQ5VT25 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
CDC42BPAQ5VT25 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
CDC42BPAQ5VT25 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC35.51■■■■□ 3.27
CDC42BPAQ5VT25 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
CDC42BPAQ5VT25 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
CDC42BPAQ5VT25 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CDC42BPAQ5VT25 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CDC42BPAQ5VT25 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC35.5■■■■□ 3.27
CDC42BPAQ5VT25 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC35.5■■■■□ 3.27
CDC42BPAQ5VT25 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC35.49■■■■□ 3.27
CDC42BPAQ5VT25 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC35.49■■■■□ 3.27
CDC42BPAQ5VT25 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC35.49■■■■□ 3.27
CDC42BPAQ5VT25 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CDC42BPAQ5VT25 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC35.49■■■■□ 3.27
CDC42BPAQ5VT25 SERBP1P1-201ENST00000396021 1160 ntBASIC35.49■■■■□ 3.27
CDC42BPAQ5VT25 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC35.49■■■■□ 3.27
CDC42BPAQ5VT25 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC35.48■■■■□ 3.27
CDC42BPAQ5VT25 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC35.48■■■■□ 3.27
CDC42BPAQ5VT25 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC35.47■■■■□ 3.27
CDC42BPAQ5VT25 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CDC42BPAQ5VT25 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC35.47■■■■□ 3.27
CDC42BPAQ5VT25 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
CDC42BPAQ5VT25 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
CDC42BPAQ5VT25 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
CDC42BPAQ5VT25 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC35.47■■■■□ 3.27
CDC42BPAQ5VT25 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC35.47■■■■□ 3.27
CDC42BPAQ5VT25 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC35.46■■■■□ 3.27
CDC42BPAQ5VT25 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
CDC42BPAQ5VT25 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC35.46■■■■□ 3.27
CDC42BPAQ5VT25 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
CDC42BPAQ5VT25 AC011298.3-201ENST00000615796 283 ntBASIC35.46■■■■□ 3.27
CDC42BPAQ5VT25 MIR5787-201ENST00000611784 55 ntBASIC35.45■■■■□ 3.27
CDC42BPAQ5VT25 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC35.45■■■■□ 3.27
CDC42BPAQ5VT25 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC35.45■■■■□ 3.26
CDC42BPAQ5VT25 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
CDC42BPAQ5VT25 C17orf82-201ENST00000623772 1530 ntBASIC35.44■■■■□ 3.26
CDC42BPAQ5VT25 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CDC42BPAQ5VT25 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC35.43■■■■□ 3.26
CDC42BPAQ5VT25 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
CDC42BPAQ5VT25 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC35.43■■■■□ 3.26
CDC42BPAQ5VT25 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
CDC42BPAQ5VT25 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC35.43■■■■□ 3.26
CDC42BPAQ5VT25 MAG-206ENST00000597035 542 ntTSL 4 BASIC35.43■■■■□ 3.26
CDC42BPAQ5VT25 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
CDC42BPAQ5VT25 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
CDC42BPAQ5VT25 AC091305.1-201ENST00000479476 895 ntBASIC35.42■■■■□ 3.26
CDC42BPAQ5VT25 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC35.42■■■■□ 3.26
CDC42BPAQ5VT25 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CDC42BPAQ5VT25 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CDC42BPAQ5VT25 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC35.41■■■■□ 3.26
CDC42BPAQ5VT25 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CDC42BPAQ5VT25 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC35.41■■■■□ 3.26
CDC42BPAQ5VT25 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC35.41■■■■□ 3.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms