Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VMA21Q3ZAQ7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VMA21Q3ZAQ7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VMA21Q3ZAQ7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
VMA21Q3ZAQ7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VMA21Q3ZAQ7 AC011551.1-201ENST00000614101 683 ntBASIC18.58■□□□□ 0.56
VMA21Q3ZAQ7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.58■□□□□ 0.56
VMA21Q3ZAQ7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VMA21Q3ZAQ7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.58■□□□□ 0.56
VMA21Q3ZAQ7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.58■□□□□ 0.56
VMA21Q3ZAQ7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
VMA21Q3ZAQ7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.57■□□□□ 0.56
VMA21Q3ZAQ7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.57■□□□□ 0.56
VMA21Q3ZAQ7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VMA21Q3ZAQ7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VMA21Q3ZAQ7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.57■□□□□ 0.56
VMA21Q3ZAQ7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VMA21Q3ZAQ7 AC004812.2-201ENST00000611079 2094 ntBASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 AC074183.2-201ENST00000623112 922 ntBASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VMA21Q3ZAQ7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 AL161729.1-201ENST00000604104 1402 ntBASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VMA21Q3ZAQ7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 AC004987.1-201ENST00000428627 508 ntBASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 ATP5G2P3-201ENST00000429083 425 ntBASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
VMA21Q3ZAQ7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VMA21Q3ZAQ7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 TSPY13P-201ENST00000338964 914 ntBASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VMA21Q3ZAQ7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
VMA21Q3ZAQ7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
VMA21Q3ZAQ7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
VMA21Q3ZAQ7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
VMA21Q3ZAQ7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
VMA21Q3ZAQ7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
VMA21Q3ZAQ7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VMA21Q3ZAQ7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VMA21Q3ZAQ7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
VMA21Q3ZAQ7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.51■□□□□ 0.55
VMA21Q3ZAQ7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
VMA21Q3ZAQ7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms