Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.28■□□□□ 0.84
CCR9P51686 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCR9P51686 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCR9P51686 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.27■□□□□ 0.84
CCR9P51686 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCR9P51686 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCR9P51686 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCR9P51686 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCR9P51686 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCR9P51686 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCR9P51686 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.27■□□□□ 0.84
CCR9P51686 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.27■□□□□ 0.84
CCR9P51686 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCR9P51686 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCR9P51686 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCR9P51686 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCR9P51686 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.27■□□□□ 0.83
CCR9P51686 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCR9P51686 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCR9P51686 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCR9P51686 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCR9P51686 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCR9P51686 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCR9P51686 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCR9P51686 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCR9P51686 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.26■□□□□ 0.83
CCR9P51686 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCR9P51686 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCR9P51686 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCR9P51686 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.25■□□□□ 0.83
CCR9P51686 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCR9P51686 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCR9P51686 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCR9P51686 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCR9P51686 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.25■□□□□ 0.83
CCR9P51686 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCR9P51686 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCR9P51686 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.25■□□□□ 0.83
CCR9P51686 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CCR9P51686 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.24■□□□□ 0.83
CCR9P51686 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.24■□□□□ 0.83
CCR9P51686 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.24■□□□□ 0.83
CCR9P51686 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCR9P51686 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.24■□□□□ 0.83
CCR9P51686 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCR9P51686 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCR9P51686 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCR9P51686 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCR9P51686 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCR9P51686 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCR9P51686 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.23■□□□□ 0.83
CCR9P51686 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCR9P51686 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.23■□□□□ 0.83
CCR9P51686 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCR9P51686 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.23■□□□□ 0.83
CCR9P51686 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCR9P51686 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CCR9P51686 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCR9P51686 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCR9P51686 GPX1-201ENST00000419349 1106 ntBASIC20.22■□□□□ 0.83
CCR9P51686 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCR9P51686 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCR9P51686 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCR9P51686 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCR9P51686 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCR9P51686 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.22■□□□□ 0.83
CCR9P51686 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCR9P51686 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCR9P51686 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCR9P51686 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCR9P51686 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCR9P51686 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCR9P51686 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCR9P51686 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.21■□□□□ 0.83
CCR9P51686 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCR9P51686 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCR9P51686 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCR9P51686 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCR9P51686 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.2■□□□□ 0.82
CCR9P51686 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCR9P51686 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCR9P51686 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCR9P51686 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCR9P51686 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCR9P51686 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCR9P51686 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCR9P51686 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCR9P51686 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCR9P51686 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCR9P51686 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms