Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SFTPBP07988 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.92■□□□□ 0.78
SFTPBP07988 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SFTPBP07988 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SFTPBP07988 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SFTPBP07988 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SFTPBP07988 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SFTPBP07988 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SFTPBP07988 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SFTPBP07988 AC018755.3-202ENST00000596210 929 ntBASIC19.91■□□□□ 0.78
SFTPBP07988 MIR6765-201ENST00000614092 87 ntBASIC19.91■□□□□ 0.78
SFTPBP07988 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.91■□□□□ 0.78
SFTPBP07988 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.91■□□□□ 0.78
SFTPBP07988 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.91■□□□□ 0.78
SFTPBP07988 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SFTPBP07988 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SFTPBP07988 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SFTPBP07988 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.91■□□□□ 0.78
SFTPBP07988 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.9■□□□□ 0.78
SFTPBP07988 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SFTPBP07988 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SFTPBP07988 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.9■□□□□ 0.78
SFTPBP07988 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SFTPBP07988 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SFTPBP07988 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SFTPBP07988 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SFTPBP07988 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SFTPBP07988 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SFTPBP07988 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
SFTPBP07988 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
SFTPBP07988 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.89■□□□□ 0.77
SFTPBP07988 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SFTPBP07988 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SFTPBP07988 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.89■□□□□ 0.77
SFTPBP07988 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.89■□□□□ 0.77
SFTPBP07988 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SFTPBP07988 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SFTPBP07988 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SFTPBP07988 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.88■□□□□ 0.77
SFTPBP07988 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SFTPBP07988 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SFTPBP07988 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.88■□□□□ 0.77
SFTPBP07988 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SFTPBP07988 AC141586.4-201ENST00000624558 1573 ntBASIC19.87■□□□□ 0.77
SFTPBP07988 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SFTPBP07988 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SFTPBP07988 BHLHE23-202ENST00000612929 1109 ntBASIC19.87■□□□□ 0.77
SFTPBP07988 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SFTPBP07988 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SFTPBP07988 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SFTPBP07988 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SFTPBP07988 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SFTPBP07988 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SFTPBP07988 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SFTPBP07988 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.86■□□□□ 0.77
SFTPBP07988 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.86■□□□□ 0.77
SFTPBP07988 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SFTPBP07988 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.86■□□□□ 0.77
SFTPBP07988 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.86■□□□□ 0.77
SFTPBP07988 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SFTPBP07988 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SFTPBP07988 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SFTPBP07988 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SFTPBP07988 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SFTPBP07988 HLA-L-211ENST00000482052 1765 ntBASIC19.85■□□□□ 0.77
SFTPBP07988 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SFTPBP07988 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SFTPBP07988 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SFTPBP07988 AC004812.2-201ENST00000611079 2094 ntBASIC19.85■□□□□ 0.77
SFTPBP07988 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.85■□□□□ 0.77
SFTPBP07988 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SFTPBP07988 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
SFTPBP07988 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SFTPBP07988 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
SFTPBP07988 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SFTPBP07988 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SFTPBP07988 AC012676.1-201ENST00000574705 1949 ntBASIC19.84■□□□□ 0.77
SFTPBP07988 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SFTPBP07988 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
SFTPBP07988 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
SFTPBP07988 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SFTPBP07988 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.83■□□□□ 0.77
SFTPBP07988 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.83■□□□□ 0.77
SFTPBP07988 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SFTPBP07988 AC139795.1-202ENST00000500444 432 ntBASIC19.83■□□□□ 0.77
SFTPBP07988 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SFTPBP07988 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SFTPBP07988 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SFTPBP07988 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.82■□□□□ 0.76
SFTPBP07988 AC010980.1-201ENST00000587192 1142 ntBASIC19.82■□□□□ 0.76
SFTPBP07988 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.82■□□□□ 0.76
SFTPBP07988 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SFTPBP07988 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SFTPBP07988 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SFTPBP07988 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SFTPBP07988 RARRES2P1-201ENST00000474487 481 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms