Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSDP07339 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTSDP07339 CR559946.2-201ENST00000623684 991 ntBASIC19.16■□□□□ 0.66
CTSDP07339 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CTSDP07339 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSDP07339 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSDP07339 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTSDP07339 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSDP07339 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTSDP07339 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTSDP07339 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSDP07339 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSDP07339 FOXO3B-201ENST00000395675 1928 ntBASIC19.15■□□□□ 0.66
CTSDP07339 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSDP07339 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CTSDP07339 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CTSDP07339 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CTSDP07339 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTSDP07339 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CTSDP07339 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSDP07339 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSDP07339 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.15■□□□□ 0.66
CTSDP07339 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSDP07339 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSDP07339 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSDP07339 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.15■□□□□ 0.66
CTSDP07339 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.15■□□□□ 0.66
CTSDP07339 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTSDP07339 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTSDP07339 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTSDP07339 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSDP07339 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSDP07339 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CTSDP07339 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTSDP07339 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTSDP07339 SMPD5-203ENST00000639008 1464 ntBASIC19.14■□□□□ 0.65
CTSDP07339 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.14■□□□□ 0.65
CTSDP07339 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSDP07339 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSDP07339 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSDP07339 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.13■□□□□ 0.65
CTSDP07339 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTSDP07339 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTSDP07339 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTSDP07339 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CTSDP07339 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CTSDP07339 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSDP07339 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CTSDP07339 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSDP07339 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CTSDP07339 ANOS2P-203ENST00000472227 1816 ntBASIC19.12■□□□□ 0.65
CTSDP07339 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.12■□□□□ 0.65
CTSDP07339 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSDP07339 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSDP07339 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.12■□□□□ 0.65
CTSDP07339 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.12■□□□□ 0.65
CTSDP07339 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CTSDP07339 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.12■□□□□ 0.65
CTSDP07339 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CTSDP07339 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.12■□□□□ 0.65
CTSDP07339 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CTSDP07339 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.11■□□□□ 0.65
CTSDP07339 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.11■□□□□ 0.65
CTSDP07339 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTSDP07339 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CTSDP07339 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.11■□□□□ 0.65
CTSDP07339 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CTSDP07339 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CTSDP07339 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSDP07339 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSDP07339 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CTSDP07339 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSDP07339 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSDP07339 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.09■□□□□ 0.65
CTSDP07339 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.09■□□□□ 0.65
CTSDP07339 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSDP07339 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSDP07339 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CTSDP07339 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CTSDP07339 DUSP8P3-201ENST00000399571 1760 ntBASIC19.09■□□□□ 0.65
CTSDP07339 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTSDP07339 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTSDP07339 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.08■□□□□ 0.65
CTSDP07339 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CTSDP07339 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.08■□□□□ 0.65
CTSDP07339 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CTSDP07339 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSDP07339 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.08■□□□□ 0.64
CTSDP07339 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CTSDP07339 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CTSDP07339 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CTSDP07339 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTSDP07339 KRT18P10-201ENST00000388836 1287 ntBASIC19.07■□□□□ 0.64
CTSDP07339 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CTSDP07339 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.07■□□□□ 0.64
CTSDP07339 AC060814.1-201ENST00000554326 538 ntBASIC19.07■□□□□ 0.64
CTSDP07339 MIR3648-2-201ENST00000581792 180 ntBASIC19.07■□□□□ 0.64
CTSDP07339 MIR3648-1-201ENST00000615959 180 ntBASIC19.07■□□□□ 0.64
CTSDP07339 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.07■□□□□ 0.64
CTSDP07339 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms