Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TCRAP04437 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRAP04437 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRAP04437 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TCRAP04437 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRAP04437 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRAP04437 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.54■□□□□ 0.4
TCRAP04437 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
TCRAP04437 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRAP04437 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRAP04437 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.53■□□□□ 0.4
TCRAP04437 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.53■□□□□ 0.4
TCRAP04437 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRAP04437 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRAP04437 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TCRAP04437 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.53■□□□□ 0.4
TCRAP04437 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.53■□□□□ 0.4
TCRAP04437 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRAP04437 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRAP04437 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TCRAP04437 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRAP04437 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TCRAP04437 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.52■□□□□ 0.4
TCRAP04437 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TCRAP04437 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TCRAP04437 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TCRAP04437 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TCRAP04437 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRAP04437 AC060814.1-201ENST00000554326 538 ntBASIC17.52■□□□□ 0.4
TCRAP04437 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.52■□□□□ 0.4
TCRAP04437 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TCRAP04437 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.52■□□□□ 0.4
TCRAP04437 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TCRAP04437 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TCRAP04437 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TCRAP04437 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TCRAP04437 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
TCRAP04437 AC233723.2-201ENST00000623798 2106 ntBASIC17.51■□□□□ 0.39
TCRAP04437 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRAP04437 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRAP04437 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRAP04437 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TCRAP04437 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
TCRAP04437 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TCRAP04437 MIR3648-2-201ENST00000581792 180 ntBASIC17.51■□□□□ 0.39
TCRAP04437 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TCRAP04437 MIR3648-1-201ENST00000615959 180 ntBASIC17.51■□□□□ 0.39
TCRAP04437 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRAP04437 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRAP04437 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRAP04437 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TCRAP04437 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TCRAP04437 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.5■□□□□ 0.39
TCRAP04437 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.5■□□□□ 0.39
TCRAP04437 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TCRAP04437 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRAP04437 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TCRAP04437 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TCRAP04437 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.5■□□□□ 0.39
TCRAP04437 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRAP04437 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRAP04437 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.5■□□□□ 0.39
TCRAP04437 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TCRAP04437 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TCRAP04437 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.49■□□□□ 0.39
TCRAP04437 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRAP04437 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRAP04437 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRAP04437 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRAP04437 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.49■□□□□ 0.39
TCRAP04437 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRAP04437 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TCRAP04437 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRAP04437 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRAP04437 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
TCRAP04437 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRAP04437 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRAP04437 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRAP04437 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRAP04437 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TCRAP04437 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRAP04437 KRT18P10-201ENST00000388836 1287 ntBASIC17.48■□□□□ 0.39
TCRAP04437 RP9P-202ENST00000450133 1212 ntBASIC17.48■□□□□ 0.39
TCRAP04437 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.48■□□□□ 0.39
TCRAP04437 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TCRAP04437 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.48■□□□□ 0.39
TCRAP04437 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
TCRAP04437 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRAP04437 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.47■□□□□ 0.39
TCRAP04437 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRAP04437 ANOS2P-203ENST00000472227 1816 ntBASIC17.47■□□□□ 0.39
TCRAP04437 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRAP04437 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TCRAP04437 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRAP04437 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.47■□□□□ 0.39
TCRAP04437 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRAP04437 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TCRAP04437 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TCRAP04437 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TCRAP04437 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms