Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 DUSP8P5-201ENST00000422884 1815 ntBASIC16.03■□□□□ 0.16
TRAV13-1A0A0B4J241 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.02■□□□□ 0.16
TRAV13-1A0A0B4J241 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-1A0A0B4J241 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-1A0A0B4J241 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRAV13-1A0A0B4J241 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-1A0A0B4J241 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-1A0A0B4J241 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV13-1A0A0B4J241 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TRAV13-1A0A0B4J241 MIR6089-201ENST00000616698 64 ntBASIC16.02■□□□□ 0.16
TRAV13-1A0A0B4J241 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV13-1A0A0B4J241 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
TRAV13-1A0A0B4J241 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV13-1A0A0B4J241 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 AC060814.1-201ENST00000554326 538 ntBASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV13-1A0A0B4J241 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-1A0A0B4J241 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV13-1A0A0B4J241 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV13-1A0A0B4J241 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-1A0A0B4J241 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV13-1A0A0B4J241 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV13-1A0A0B4J241 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV13-1A0A0B4J241 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV13-1A0A0B4J241 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV13-1A0A0B4J241 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV13-1A0A0B4J241 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV13-1A0A0B4J241 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV13-1A0A0B4J241 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV13-1A0A0B4J241 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
TRAV13-1A0A0B4J241 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV13-1A0A0B4J241 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV13-1A0A0B4J241 HLA-L-211ENST00000482052 1765 ntBASIC15.98■□□□□ 0.15
TRAV13-1A0A0B4J241 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV13-1A0A0B4J241 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-1A0A0B4J241 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-1A0A0B4J241 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-1A0A0B4J241 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-1A0A0B4J241 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV13-1A0A0B4J241 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV13-1A0A0B4J241 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV13-1A0A0B4J241 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV13-1A0A0B4J241 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms