Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.86■■□□□ 1.73
SCN10AQ9Y5Y9 AC135279.3-201ENST00000610945 1311 ntBASIC25.85■■□□□ 1.73
SCN10AQ9Y5Y9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SCN10AQ9Y5Y9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SCN10AQ9Y5Y9 AC004448.1-201ENST00000458332 883 ntBASIC25.85■■□□□ 1.73
SCN10AQ9Y5Y9 AC142381.2-201ENST00000566120 298 ntBASIC25.85■■□□□ 1.73
SCN10AQ9Y5Y9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SCN10AQ9Y5Y9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SCN10AQ9Y5Y9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SCN10AQ9Y5Y9 AC024257.2-201ENST00000549699 147 ntBASIC25.84■■□□□ 1.73
SCN10AQ9Y5Y9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SCN10AQ9Y5Y9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SCN10AQ9Y5Y9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SCN10AQ9Y5Y9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
SCN10AQ9Y5Y9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SCN10AQ9Y5Y9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SCN10AQ9Y5Y9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SCN10AQ9Y5Y9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.83■■□□□ 1.73
SCN10AQ9Y5Y9 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.83■■□□□ 1.73
SCN10AQ9Y5Y9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC25.83■■□□□ 1.73
SCN10AQ9Y5Y9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.83■■□□□ 1.72
SCN10AQ9Y5Y9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SCN10AQ9Y5Y9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.82■■□□□ 1.72
SCN10AQ9Y5Y9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SCN10AQ9Y5Y9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SCN10AQ9Y5Y9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
SCN10AQ9Y5Y9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SCN10AQ9Y5Y9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SCN10AQ9Y5Y9 EDA-201ENST00000338901 1233 ntBASIC25.81■■□□□ 1.72
SCN10AQ9Y5Y9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.81■■□□□ 1.72
SCN10AQ9Y5Y9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.81■■□□□ 1.72
SCN10AQ9Y5Y9 AL136162.1-201ENST00000607711 1078 ntBASIC25.81■■□□□ 1.72
SCN10AQ9Y5Y9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 AC131274.2-201ENST00000580697 1507 ntBASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.8■■□□□ 1.72
SCN10AQ9Y5Y9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
SCN10AQ9Y5Y9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.79■■□□□ 1.72
SCN10AQ9Y5Y9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.79■■□□□ 1.72
SCN10AQ9Y5Y9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
SCN10AQ9Y5Y9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.79■■□□□ 1.72
SCN10AQ9Y5Y9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SCN10AQ9Y5Y9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
SCN10AQ9Y5Y9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.78■■□□□ 1.72
SCN10AQ9Y5Y9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.78■■□□□ 1.72
SCN10AQ9Y5Y9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
SCN10AQ9Y5Y9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.78■■□□□ 1.72
SCN10AQ9Y5Y9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
SCN10AQ9Y5Y9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.78■■□□□ 1.72
SCN10AQ9Y5Y9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.78■■□□□ 1.72
SCN10AQ9Y5Y9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.78■■□□□ 1.72
SCN10AQ9Y5Y9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SCN10AQ9Y5Y9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCN10AQ9Y5Y9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.77■■□□□ 1.72
SCN10AQ9Y5Y9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCN10AQ9Y5Y9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
SCN10AQ9Y5Y9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.77■■□□□ 1.72
SCN10AQ9Y5Y9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCN10AQ9Y5Y9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SCN10AQ9Y5Y9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.77■■□□□ 1.72
SCN10AQ9Y5Y9 AC005703.6-201ENST00000623265 1329 ntBASIC25.77■■□□□ 1.72
SCN10AQ9Y5Y9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.76■■□□□ 1.72
SCN10AQ9Y5Y9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.76■■□□□ 1.72
SCN10AQ9Y5Y9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.72
SCN10AQ9Y5Y9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.76■■□□□ 1.71
SCN10AQ9Y5Y9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
SCN10AQ9Y5Y9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.76■■□□□ 1.71
SCN10AQ9Y5Y9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.76■■□□□ 1.71
SCN10AQ9Y5Y9 AC092803.2-201ENST00000564287 1899 ntBASIC25.76■■□□□ 1.71
SCN10AQ9Y5Y9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCN10AQ9Y5Y9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
SCN10AQ9Y5Y9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SCN10AQ9Y5Y9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
SCN10AQ9Y5Y9 AP001330.3-201ENST00000520123 633 ntBASIC25.75■■□□□ 1.71
SCN10AQ9Y5Y9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SCN10AQ9Y5Y9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SCN10AQ9Y5Y9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 SRD5A1P1-201ENST00000442297 786 ntBASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 AF213884.3-201ENST00000563833 479 ntBASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SCN10AQ9Y5Y9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms