Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 DUX4L24-201ENST00000617576 1269 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 LINC01971-201ENST00000617888 1048 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 DUX4L22-201ENST00000618238 1269 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 DUX4L20-201ENST00000619712 1269 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 DUX4L21-201ENST00000622058 1269 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 DUX4L10-201ENST00000622460 1267 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 DUX4L25-201ENST00000624915 1269 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 HLA-L-211ENST00000482052 1765 ntBASIC18.91■□□□□ 0.62
RCL1Q9Y2P8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RCL1Q9Y2P8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.89■□□□□ 0.62
RCL1Q9Y2P8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RCL1Q9Y2P8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 HLA-V-202ENST00000446817 847 ntBASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 AC233723.2-201ENST00000623798 2106 ntBASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RCL1Q9Y2P8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RCL1Q9Y2P8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCL1Q9Y2P8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RCL1Q9Y2P8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.87■□□□□ 0.61
RCL1Q9Y2P8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCL1Q9Y2P8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.87■□□□□ 0.61
RCL1Q9Y2P8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.87■□□□□ 0.61
RCL1Q9Y2P8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.87■□□□□ 0.61
RCL1Q9Y2P8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RCL1Q9Y2P8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RCL1Q9Y2P8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RCL1Q9Y2P8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCL1Q9Y2P8 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.86■□□□□ 0.61
RCL1Q9Y2P8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.86■□□□□ 0.61
RCL1Q9Y2P8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCL1Q9Y2P8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.86■□□□□ 0.61
RCL1Q9Y2P8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCL1Q9Y2P8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RCL1Q9Y2P8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 EP400NL-214ENST00000641289 2402 ntBASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RCL1Q9Y2P8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.84■□□□□ 0.61
RCL1Q9Y2P8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
RCL1Q9Y2P8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RCL1Q9Y2P8 LINC00565-201ENST00000562710 2331 ntBASIC18.83■□□□□ 0.61
RCL1Q9Y2P8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
RCL1Q9Y2P8 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RCL1Q9Y2P8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.83■□□□□ 0.6
RCL1Q9Y2P8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCL1Q9Y2P8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
RCL1Q9Y2P8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCL1Q9Y2P8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RCL1Q9Y2P8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms