Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC30.02■■■□□ 2.4
ZNF428Q96B54 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.02■■■□□ 2.4
ZNF428Q96B54 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.4
ZNF428Q96B54 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
ZNF428Q96B54 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.01■■■□□ 2.39
ZNF428Q96B54 GRAMD4P7-201ENST00000578182 1232 ntBASIC30.01■■■□□ 2.39
ZNF428Q96B54 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
ZNF428Q96B54 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30■■■□□ 2.39
ZNF428Q96B54 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30■■■□□ 2.39
ZNF428Q96B54 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30■■■□□ 2.39
ZNF428Q96B54 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ZNF428Q96B54 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30■■■□□ 2.39
ZNF428Q96B54 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30■■■□□ 2.39
ZNF428Q96B54 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ZNF428Q96B54 AL139125.2-201ENST00000623134 1869 ntBASIC29.99■■■□□ 2.39
ZNF428Q96B54 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZNF428Q96B54 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC29.99■■■□□ 2.39
ZNF428Q96B54 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZNF428Q96B54 TSPY9P-201ENST00000440215 945 ntBASIC29.99■■■□□ 2.39
ZNF428Q96B54 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC29.99■■■□□ 2.39
ZNF428Q96B54 TSPY11P-201ENST00000442607 1045 ntBASIC29.99■■■□□ 2.39
ZNF428Q96B54 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.99■■■□□ 2.39
ZNF428Q96B54 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
ZNF428Q96B54 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZNF428Q96B54 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
ZNF428Q96B54 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC29.98■■■□□ 2.39
ZNF428Q96B54 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC29.98■■■□□ 2.39
ZNF428Q96B54 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC29.98■■■□□ 2.39
ZNF428Q96B54 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
ZNF428Q96B54 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
ZNF428Q96B54 UNC93B8-201ENST00000511903 705 ntBASIC29.98■■■□□ 2.39
ZNF428Q96B54 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZNF428Q96B54 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.97■■■□□ 2.39
ZNF428Q96B54 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.97■■■□□ 2.39
ZNF428Q96B54 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.97■■■□□ 2.39
ZNF428Q96B54 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
ZNF428Q96B54 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
ZNF428Q96B54 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC29.95■■■□□ 2.39
ZNF428Q96B54 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC29.95■■■□□ 2.39
ZNF428Q96B54 BX664725.1-201ENST00000438252 379 ntBASIC29.95■■■□□ 2.39
ZNF428Q96B54 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.95■■■□□ 2.39
ZNF428Q96B54 GAK-223ENST00000628912 497 ntTSL 5 BASIC29.95■■■□□ 2.39
ZNF428Q96B54 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.38
ZNF428Q96B54 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
ZNF428Q96B54 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
ZNF428Q96B54 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
ZNF428Q96B54 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.94■■■□□ 2.38
ZNF428Q96B54 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ZNF428Q96B54 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
ZNF428Q96B54 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.94■■■□□ 2.38
ZNF428Q96B54 KRT125P-201ENST00000546827 989 ntBASIC29.94■■■□□ 2.38
ZNF428Q96B54 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ZNF428Q96B54 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ZNF428Q96B54 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC29.94■■■□□ 2.38
ZNF428Q96B54 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.94■■■□□ 2.38
ZNF428Q96B54 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ZNF428Q96B54 HLA-L-211ENST00000482052 1765 ntBASIC29.93■■■□□ 2.38
ZNF428Q96B54 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ZNF428Q96B54 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
ZNF428Q96B54 Z92544.1-202ENST00000571933 1220 ntBASIC29.93■■■□□ 2.38
ZNF428Q96B54 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZNF428Q96B54 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZNF428Q96B54 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
ZNF428Q96B54 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZNF428Q96B54 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.92■■■□□ 2.38
ZNF428Q96B54 AC141586.4-201ENST00000624558 1573 ntBASIC29.92■■■□□ 2.38
ZNF428Q96B54 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC29.92■■■□□ 2.38
ZNF428Q96B54 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC29.92■■■□□ 2.38
ZNF428Q96B54 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
ZNF428Q96B54 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ZNF428Q96B54 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC29.91■■■□□ 2.38
ZNF428Q96B54 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ZNF428Q96B54 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC29.91■■■□□ 2.38
ZNF428Q96B54 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
ZNF428Q96B54 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZNF428Q96B54 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZNF428Q96B54 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.9■■■□□ 2.38
ZNF428Q96B54 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
ZNF428Q96B54 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.9■■■□□ 2.38
ZNF428Q96B54 MIR4281-201ENST00000580852 62 ntBASIC29.9■■■□□ 2.38
ZNF428Q96B54 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZNF428Q96B54 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.9■■■□□ 2.38
ZNF428Q96B54 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC29.9■■■□□ 2.38
ZNF428Q96B54 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
ZNF428Q96B54 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.9■■■□□ 2.38
ZNF428Q96B54 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
ZNF428Q96B54 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC29.88■■■□□ 2.37
ZNF428Q96B54 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
ZNF428Q96B54 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.88■■■□□ 2.37
ZNF428Q96B54 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
ZNF428Q96B54 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.88■■■□□ 2.37
ZNF428Q96B54 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
ZNF428Q96B54 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
ZNF428Q96B54 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
ZNF428Q96B54 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
ZNF428Q96B54 LINC00543-201ENST00000567234 1845 ntBASIC29.87■■■□□ 2.37
ZNF428Q96B54 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
ZNF428Q96B54 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
ZNF428Q96B54 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC29.87■■■□□ 2.37
ZNF428Q96B54 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.87■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms