Protein–RNA interactions for Protein: Q8NEN9

PDZD8, PDZ domain-containing protein 8, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8Q8NEN9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.35■■□□□ 1.49
PDZD8Q8NEN9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.35■■□□□ 1.49
PDZD8Q8NEN9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.35■■□□□ 1.49
PDZD8Q8NEN9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDZD8Q8NEN9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.35■■□□□ 1.49
PDZD8Q8NEN9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDZD8Q8NEN9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.35■■□□□ 1.49
PDZD8Q8NEN9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDZD8Q8NEN9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDZD8Q8NEN9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.34■■□□□ 1.49
PDZD8Q8NEN9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.34■■□□□ 1.49
PDZD8Q8NEN9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.34■■□□□ 1.49
PDZD8Q8NEN9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDZD8Q8NEN9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDZD8Q8NEN9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
PDZD8Q8NEN9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDZD8Q8NEN9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.33■■□□□ 1.49
PDZD8Q8NEN9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDZD8Q8NEN9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
PDZD8Q8NEN9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.33■■□□□ 1.49
PDZD8Q8NEN9 MIR6724-1-201ENST00000616420 92 ntBASIC24.33■■□□□ 1.49
PDZD8Q8NEN9 MIR6724-2-201ENST00000616483 92 ntBASIC24.33■■□□□ 1.49
PDZD8Q8NEN9 MIR6724-4-201ENST00000617390 92 ntBASIC24.33■■□□□ 1.49
PDZD8Q8NEN9 MIR6724-3-201ENST00000622482 92 ntBASIC24.33■■□□□ 1.49
PDZD8Q8NEN9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.33■■□□□ 1.48
PDZD8Q8NEN9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PDZD8Q8NEN9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PDZD8Q8NEN9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
PDZD8Q8NEN9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PDZD8Q8NEN9 SNX5-217ENST00000606557 1087 ntBASIC24.32■■□□□ 1.48
PDZD8Q8NEN9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.32■■□□□ 1.48
PDZD8Q8NEN9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.32■■□□□ 1.48
PDZD8Q8NEN9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDZD8Q8NEN9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDZD8Q8NEN9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDZD8Q8NEN9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.31■■□□□ 1.48
PDZD8Q8NEN9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PDZD8Q8NEN9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PDZD8Q8NEN9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.31■■□□□ 1.48
PDZD8Q8NEN9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.3■■□□□ 1.48
PDZD8Q8NEN9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
PDZD8Q8NEN9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.3■■□□□ 1.48
PDZD8Q8NEN9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PDZD8Q8NEN9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.29■■□□□ 1.48
PDZD8Q8NEN9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDZD8Q8NEN9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.29■■□□□ 1.48
PDZD8Q8NEN9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.29■■□□□ 1.48
PDZD8Q8NEN9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
PDZD8Q8NEN9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
PDZD8Q8NEN9 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.29■■□□□ 1.48
PDZD8Q8NEN9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 AC135731.1-201ENST00000569415 2548 ntBASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 MIR6722-201ENST00000617286 78 ntBASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PDZD8Q8NEN9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.27■■□□□ 1.48
PDZD8Q8NEN9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.27■■□□□ 1.48
PDZD8Q8NEN9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PDZD8Q8NEN9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.26■■□□□ 1.47
PDZD8Q8NEN9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 AC004448.1-201ENST00000458332 883 ntBASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PDZD8Q8NEN9 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 AL117332.1-201ENST00000622628 974 ntBASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
PDZD8Q8NEN9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms