Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 HNRNPK-210ENST00000492865 528 ntTSL 26.39□□□□□ -1.396e-6■□□□□ 9.2
DDX42Q86XP3 MTF2-208ENST00000476037 788 ntTSL 56.33□□□□□ -1.46e-6■□□□□ 9.2
DDX42Q86XP3 MTF2-203ENST00000467953 1870 ntTSL 1 (best)6□□□□□ -1.456e-6■□□□□ 9.2
DDX42Q86XP3 PPP2R5C-213ENST00000554504 448 ntTSL 35.81□□□□□ -1.482e-7■□□□□ 9.2
DDX42Q86XP3 CPOX-202ENST00000510489 526 ntTSL 25.65□□□□□ -1.56e-6■□□□□ 9.2
DDX42Q86XP3 TMEM267-203ENST00000506860 736 ntTSL 35.61□□□□□ -1.516e-6■□□□□ 9.2
DDX42Q86XP3 MTF2-212ENST00000497976 760 ntTSL 55.2□□□□□ -1.586e-6■□□□□ 9.2
DDX42Q86XP3 TMEM267-205ENST00000511525 629 ntTSL 33.93□□□□□ -1.786e-6■□□□□ 9.2
DDX42Q86XP3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.87■■□□□ 1.733e-8■□□□□ 9.2
DDX42Q86XP3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.76■■□□□ 1.713e-8■□□□□ 9.2
DDX42Q86XP3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.453e-8■□□□□ 9.2
DDX42Q86XP3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.93■■□□□ 1.423e-8■□□□□ 9.2
DDX42Q86XP3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.72■■□□□ 1.395e-6■□□□□ 9.2
DDX42Q86XP3 PTBP1-207ENST00000585932 1030 ntTSL 321.94■■□□□ 1.13e-8■□□□□ 9.2
DDX42Q86XP3 PTBP1-219ENST00000621737 1125 ntTSL 520.84■□□□□ 0.933e-8■□□□□ 9.2
DDX42Q86XP3 PTBP1-208ENST00000585956 767 ntTSL 320.7■□□□□ 0.93e-8■□□□□ 9.2
DDX42Q86XP3 PTBP1-215ENST00000589883 683 ntTSL 320.33■□□□□ 0.853e-8■□□□□ 9.2
DDX42Q86XP3 CDC16-210ENST00000494766 1003 ntTSL 220.23■□□□□ 0.833e-8■□□□□ 9.2
DDX42Q86XP3 CDC16-201ENST00000252457 2034 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.523e-8■□□□□ 9.2
DDX42Q86XP3 CDC16-205ENST00000375308 2034 ntTSL 1 (best) BASIC11.77□□□□□ -0.523e-8■□□□□ 9.2
DDX42Q86XP3 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC13.27□□□□□ -0.291e-79■□□□□ 9.1
DDX42Q86XP3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.97■■□□□ 1.436e-14■□□□□ 9.1
DDX42Q86XP3 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)19.32■□□□□ 0.686e-14■□□□□ 9.1
DDX42Q86XP3 RBM14-207ENST00000461478 693 ntTSL 222.28■■□□□ 1.163e-7■□□□□ 9
DDX42Q86XP3 SEMA4C-202ENST00000442264 817 ntTSL 321.59■■□□□ 1.054e-6■□□□□ 9
DDX42Q86XP3 RBM14-206ENST00000460762 459 ntTSL 221.45■■□□□ 1.023e-7■□□□□ 9
DDX42Q86XP3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.873e-7■□□□□ 9
DDX42Q86XP3 RBM14-RBM4-202ENST00000421355 2034 ntTSL 220.32■□□□□ 0.843e-7■□□□□ 9
DDX42Q86XP3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.79■□□□□ 0.63e-7■□□□□ 9
DDX42Q86XP3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.9■□□□□ 0.463e-7■□□□□ 9
DDX42Q86XP3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.343e-7■□□□□ 9
DDX42Q86XP3 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC14.26□□□□□ -0.133e-7■□□□□ 9
DDX42Q86XP3 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.83□□□□□ -0.23e-7■□□□□ 9
DDX42Q86XP3 RBM14-RBM4-204ENST00000511114 523 ntTSL 412.95□□□□□ -0.343e-7■□□□□ 9
DDX42Q86XP3 RBM14-203ENST00000409372 876 ntTSL 2 BASIC12.94□□□□□ -0.343e-7■□□□□ 9
DDX42Q86XP3 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC8.64□□□□□ -1.034e-14■□□□□ 9
DDX42Q86XP3 ELOVL5-204ENST00000465983 696 ntTSL 313.47□□□□□ -0.259e-7■□□□□ 8.9
DDX42Q86XP3 ELOVL5-206ENST00000486973 794 ntTSL 313.35□□□□□ -0.279e-7■□□□□ 8.9
DDX42Q86XP3 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC12.83□□□□□ -0.369e-7■□□□□ 8.9
DDX42Q86XP3 ELOVL5-205ENST00000485336 761 ntTSL 510.1□□□□□ -0.799e-7■□□□□ 8.9
DDX42Q86XP3 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC8.76□□□□□ -1.019e-7■□□□□ 8.9
DDX42Q86XP3 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.139e-7■□□□□ 8.9
DDX42Q86XP3 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.36□□□□□ -1.239e-7■□□□□ 8.9
DDX42Q86XP3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.016e-6■□□□□ 8.9
DDX42Q86XP3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.476e-6■□□□□ 8.9
DDX42Q86XP3 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.716e-6■□□□□ 8.9
DDX42Q86XP3 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC8.22□□□□□ -1.091e-323■□□□□ 8.9
DDX42Q86XP3 MALAT1-216ENST00000620465 333 ntTSL 24.9□□□□□ -1.631e-323■□□□□ 8.9
DDX42Q86XP3 GTPBP2-210ENST00000496137 516 ntTSL 37.17□□□□□ -1.263e-8■□□□□ 8.8
DDX42Q86XP3 FAM129B-207ENST00000484348 654 ntTSL 1 (best)24.38■■□□□ 1.491e-6■□□□□ 8.8
DDX42Q86XP3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.551e-6■□□□□ 8.8
DDX42Q86XP3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.57■□□□□ 0.081e-6■□□□□ 8.8
DDX42Q86XP3 FAM129B-204ENST00000468379 828 ntTSL 315.15■□□□□ 0.021e-6■□□□□ 8.8
DDX42Q86XP3 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC13.68□□□□□ -0.221e-6■□□□□ 8.8
DDX42Q86XP3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.626e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.61■■□□□ 1.536e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.76■■□□□ 1.236e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.57■■□□□ 1.046e-7■□□□□ 8.7
DDX42Q86XP3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.52■□□□□ 0.886e-7■□□□□ 8.7
DDX42Q86XP3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.696e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.526e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.2■□□□□ 0.56e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.61■□□□□ 0.096e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.25■□□□□ 0.036e-7■□□□□ 8.7
DDX42Q86XP3 SEMA4C-206ENST00000482925 3776 ntTSL 214.96□□□□□ -0.026e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.95□□□□□ -0.026e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.086e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC14.27□□□□□ -0.126e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC14.05□□□□□ -0.166e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-219ENST00000514940 1332 ntTSL 512.43□□□□□ -0.426e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-221ENST00000536078 423 ntTSL 212.18□□□□□ -0.466e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-206ENST00000398129 3787 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.466e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC11.99□□□□□ -0.496e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC11.41□□□□□ -0.586e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC11.03□□□□□ -0.646e-7■□□□□ 8.7
DDX42Q86XP3 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.686e-7■□□□□ 8.7
DDX42Q86XP3 HSP90AB1-202ENST00000371554 2674 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.696e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-221ENST00000511637 5999 ntTSL 1 (best)10.71□□□□□ -0.696e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-204ENST00000366809 4839 ntTSL 1 (best)10.44□□□□□ -0.746e-7■□□□□ 8.7
DDX42Q86XP3 HSP90AB1-201ENST00000353801 2582 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.846e-7■□□□□ 8.7
DDX42Q86XP3 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.896e-7■□□□□ 8.7
DDX42Q86XP3 ADD1-209ENST00000503169 2394 ntTSL 28.53□□□□□ -1.046e-7■□□□□ 8.7
DDX42Q86XP3 AFDN-215ENST00000497596 728 ntTSL 28.52□□□□□ -1.056e-7■□□□□ 8.7
DDX42Q86XP3 CTBP2-206ENST00000460976 603 ntTSL 527.96■■■□□ 2.079e-8■□□□□ 8.7
DDX42Q86XP3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.719e-8■□□□□ 8.7
DDX42Q86XP3 CTBP2-208ENST00000476817 705 ntTSL 322.1■■□□□ 1.139e-8■□□□□ 8.7
DDX42Q86XP3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.959e-8■□□□□ 8.7
DDX42Q86XP3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.829e-8■□□□□ 8.7
DDX42Q86XP3 CTBP2-213ENST00000530930 425 ntTSL 511.89□□□□□ -0.519e-8■□□□□ 8.7
DDX42Q86XP3 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.69e-8■□□□□ 8.7
DDX42Q86XP3 CTBP2-212ENST00000530884 578 ntTSL 311.17□□□□□ -0.629e-8■□□□□ 8.7
DDX42Q86XP3 ADARB1-208ENST00000462214 587 ntTSL 38.8□□□□□ -19e-8■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-238ENST00000521116 806 ntTSL 422.2■■□□□ 1.146e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-228ENST00000515714 690 ntTSL 419.95■□□□□ 0.786e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-245ENST00000523137 1563 ntTSL 419.45■□□□□ 0.76e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-207ENST00000503105 559 ntTSL 318.65■□□□□ 0.586e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-212ENST00000505087 592 ntTSL 318.65■□□□□ 0.586e-33■□□□□ 8.7
DDX42Q86XP3 CDK5RAP3-207ENST00000578134 831 ntTSL 317.58■□□□□ 0.41e-11■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.5■□□□□ 0.396e-33■□□□□ 8.7
DDX42Q86XP3 HNRNPH1-208ENST00000503664 569 ntTSL 417.5■□□□□ 0.396e-33■□□□□ 8.7
Retrieved 100 of 2,477 protein–RNA pairs in 83.7 ms