RNA–Protein interactions for RNA: ENST00000494766.5

CDC16-210, Transcript of cell division cycle 16, humanhuman

TSL 2

Gene CDC16, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-210ENST00000494766 NISCHQ9Y2I1 1504 aa46.85■■■■■ 5.09
CDC16-210ENST00000494766 CCDC180Q9P1Z9 1646 aa41.6■■■■■ 4.25
CDC16-210ENST00000494766 ABCC9O60706 1549 aa40.86■■■■■ 4.13
CDC16-210ENST00000494766 DCAF8L2P0C7V8 631 aa39.32■■■■□ 3.89
CDC16-210ENST00000494766 RB1CC1Q8TDY2 1594 aa39.18■■■■□ 3.86
CDC16-210ENST00000494766 NACADO15069 1562 aa39.12■■■■□ 3.85
CDC16-210ENST00000494766 ZCCHC6Q5VYS8 1495 aaKnown RBP39■■■■□ 3.83
CDC16-210ENST00000494766 MYO15BQ96JP2 1530 aa38.8■■■■□ 3.8
CDC16-210ENST00000494766 DCAF1Q9Y4B6 1507 aa38.67■■■■□ 3.78
CDC16-210ENST00000494766 UNC13AQ9UPW8 1703 aa38.42■■■■□ 3.74
CDC16-210ENST00000494766 PABPN1Q86U42 306 aaKnown RBP eCLIP38.23■■■■□ 3.71
CDC16-210ENST00000494766 SCRIBQ14160 1630 aa38.08■■■■□ 3.69
CDC16-210ENST00000494766 BICRAQ9NZM4 1560 aa38.07■■■■□ 3.69
CDC16-210ENST00000494766 DNAJC5BQ9UF47 199 aa37.58■■■■□ 3.61
CDC16-210ENST00000494766 SHROOM4Q9ULL8 1493 aa37.45■■■■□ 3.59
CDC16-210ENST00000494766 EIF4G1Q04637 1599 aaKnown RBP37.04■■■■□ 3.52
CDC16-210ENST00000494766 CC2D2AQ9P2K1 1620 aa36.92■■■■□ 3.5
CDC16-210ENST00000494766 CECR2Q9BXF3 1484 aa36.65■■■■□ 3.46
CDC16-210ENST00000494766 SMARCA4P51532 1647 aa36.37■■■■□ 3.41
CDC16-210ENST00000494766 BAZ1AQ9NRL2 1556 aaPredicted RBP36.28■■■■□ 3.4
CDC16-210ENST00000494766 MROH2BQ7Z745 1585 aa36.17■■■■□ 3.38
CDC16-210ENST00000494766 ATAD2BQ9ULI0 1458 aa36.17■■■■□ 3.38
CDC16-210ENST00000494766 NCAPD3P42695 1498 aa36.11■■■■□ 3.37
CDC16-210ENST00000494766 SMARCA2P51531 1590 aa36.06■■■■□ 3.36
CDC16-210ENST00000494766 PEG3Q9GZU2 1588 aa35.94■■■■□ 3.34
CDC16-210ENST00000494766 HMGXB3Q12766 1538 aa35.9■■■■□ 3.34
CDC16-210ENST00000494766 BAZ1BQ9UIG0 1483 aaKnown RBP35.86■■■■□ 3.33
CDC16-210ENST00000494766 WIZO95785 1651 aa35.82■■■■□ 3.33
CDC16-210ENST00000494766 RSF1Q96T23 1441 aaPredicted RBP35.73■■■■□ 3.31
CDC16-210ENST00000494766 NESP48681 1621 aa35.38■■■■□ 3.25
CDC16-210ENST00000494766 TOP2AP11388 1531 aaKnown RBP35.33■■■■□ 3.25
CDC16-210ENST00000494766 LAMC3Q9Y6N6 1575 aa35.15■■■■□ 3.22
CDC16-210ENST00000494766 ERCC6Q03468 1493 aa35.15■■■■□ 3.22
CDC16-210ENST00000494766 CADPSQ9ULU8 1353 aa35.08■■■■□ 3.21
CDC16-210ENST00000494766 CCDC88BA6NC98 1476 aa34.97■■■■□ 3.19
CDC16-210ENST00000494766 KIF21AQ7Z4S6 1674 aa34.94■■■■□ 3.18
CDC16-210ENST00000494766 SUPT5HO00267 1087 aaKnown RBP34.93■■■■□ 3.18
CDC16-210ENST00000494766 PDS5BQ9NTI5 1447 aa34.91■■■■□ 3.18
CDC16-210ENST00000494766 CFTRP13569 1480 aa34.86■■■■□ 3.17
CDC16-210ENST00000494766 THOC2Q8NI27 1593 aaKnown RBP34.75■■■■□ 3.15
CDC16-210ENST00000494766 CUX2O14529 1486 aa34.71■■■■□ 3.15
CDC16-210ENST00000494766 FANCD2Q9BXW9 1451 aa34.7■■■■□ 3.15
CDC16-210ENST00000494766 CEP164Q9UPV0 1460 aa34.63■■■■□ 3.13
CDC16-210ENST00000494766 PRDM2Q13029 1718 aa34.62■■■■□ 3.13
CDC16-210ENST00000494766 MRC2Q9UBG0 1479 aa34.58■■■■□ 3.13
CDC16-210ENST00000494766 WDR62O43379 1518 aa34.46■■■■□ 3.11
CDC16-210ENST00000494766 URB2Q14146 1524 aaKnown RBP34.38■■■■□ 3.09
CDC16-210ENST00000494766 TOPBP1Q92547 1522 aa34.15■■■■□ 3.06
CDC16-210ENST00000494766 DNMBPQ6XZF7 1577 aa34.08■■■■□ 3.05
CDC16-210ENST00000494766 ABCC8Q09428 1581 aa34.06■■■■□ 3.04
CDC16-210ENST00000494766 CUX1P39880 1505 aa33.91■■■■□ 3.02
CDC16-210ENST00000494766 IFT140Q96RY7 1462 aa33.88■■■■□ 3.01
CDC16-210ENST00000494766 POLA1P09884 1462 aaPredicted RBP33.86■■■■□ 3.01
CDC16-210ENST00000494766 ZNF608Q9ULD9 1512 aaPredicted RBP33.84■■■■□ 3.01
CDC16-210ENST00000494766 FGD5Q6ZNL6 1462 aa33.79■■■■□ 3
CDC16-210ENST00000494766 TARBP1Q13395 1621 aaKnown RBP33.79■■■■□ 3
CDC16-210ENST00000494766 RAD54L2Q9Y4B4 1467 aa33.78■■■■□ 3
CDC16-210ENST00000494766 DNAJC5Q9H3Z4 198 aa33.75■■■□□ 2.99
CDC16-210ENST00000494766 SOGA1O94964 1423 aa33.74■■■□□ 2.99
CDC16-210ENST00000494766 WRNQ14191 1432 aaPredicted RBP eCLIP33.66■■■□□ 2.98
CDC16-210ENST00000494766 EIF4G3O43432 1585 aaKnown RBP33.65■■■□□ 2.98
CDC16-210ENST00000494766 AQRO60306 1485 aaKnown RBP eCLIP33.65■■■□□ 2.983e-7■■■■■ 43.6
CDC16-210ENST00000494766 SYNJ1O43426 1573 aa33.63■■■□□ 2.97
CDC16-210ENST00000494766 TDRD9Q8NDG6 1382 aaKnown RBP33.59■■■□□ 2.97
CDC16-210ENST00000494766 TOP2BQ02880 1626 aa33.58■■■□□ 2.97
CDC16-210ENST00000494766 BIVM-ERCC5R4GMW8 1640 aa33.58■■■□□ 2.97
CDC16-210ENST00000494766 WDR97A6NE52 1622 aa33.5■■■□□ 2.95
CDC16-210ENST00000494766 ABCA10Q8WWZ4 1543 aa33.41■■■□□ 2.94
CDC16-210ENST00000494766 OSCARQ8IYS5 282 aa33.36■■■□□ 2.93
CDC16-210ENST00000494766 GAPVD1Q14C86 1478 aa33.32■■■□□ 2.92
CDC16-210ENST00000494766 ABCA5Q8WWZ7 1642 aa33.3■■■□□ 2.92
CDC16-210ENST00000494766 GRIN2BQ13224 1484 aa33.3■■■□□ 2.92
CDC16-210ENST00000494766 SNAPC4Q5SXM2 1469 aa33.29■■■□□ 2.92
CDC16-210ENST00000494766 PBRM1Q86U86 1689 aa33.29■■■□□ 2.92
CDC16-210ENST00000494766 CHD1O14646 1710 aa33.28■■■□□ 2.92
CDC16-210ENST00000494766 FBLN2P98095 1184 aa33.28■■■□□ 2.92
CDC16-210ENST00000494766 MAGI1Q96QZ7 1491 aaPredicted RBP33.18■■■□□ 2.9
CDC16-210ENST00000494766 CHMP7Q8WUX9 453 aaPredicted RBP33.12■■■□□ 2.89
CDC16-210ENST00000494766 SYNJ2O15056 1496 aa33.07■■■□□ 2.88
CDC16-210ENST00000494766 ERICH3Q5RHP9 1530 aa32.99■■■□□ 2.87
CDC16-210ENST00000494766 ADAMTS12P58397 1594 aa32.98■■■□□ 2.87
CDC16-210ENST00000494766 KIF27Q86VH2 1401 aa32.94■■■□□ 2.86
CDC16-210ENST00000494766 TRIM41Q8WV44 630 aa32.92■■■□□ 2.86
CDC16-210ENST00000494766 FHAD1B1AJZ9 1412 aa32.91■■■□□ 2.86
CDC16-210ENST00000494766 GRIN2AQ12879 1464 aa32.88■■■□□ 2.85
CDC16-210ENST00000494766 IGF1RP08069 1367 aa32.85■■■□□ 2.85
CDC16-210ENST00000494766 CLASP1Q7Z460 1538 aa32.85■■■□□ 2.85
CDC16-210ENST00000494766 RIMBP3CA6NJZ7 1639 aa32.84■■■□□ 2.85
CDC16-210ENST00000494766 RIMBP3BA6NNM3 1639 aa32.84■■■□□ 2.85
CDC16-210ENST00000494766 RIMBP3Q9UFD9 1639 aa32.84■■■□□ 2.85
CDC16-210ENST00000494766 ARHGEF11O15085 1522 aa32.81■■■□□ 2.84
CDC16-210ENST00000494766 RUSC2Q8N2Y8 1516 aa32.79■■■□□ 2.84
CDC16-210ENST00000494766 CEP170Q5SW79 1584 aa32.76■■■□□ 2.84
CDC16-210ENST00000494766 NUP160Q12769 1436 aa32.72■■■□□ 2.83
CDC16-210ENST00000494766 CUL7Q14999 1698 aa32.7■■■□□ 2.83
CDC16-210ENST00000494766 CARMIL1Q5VZK9 1371 aa32.65■■■□□ 2.82
CDC16-210ENST00000494766 CYB5RLQ6IPT4 315 aa32.58■■■□□ 2.81
CDC16-210ENST00000494766 ARAP1Q96P48 1450 aa32.55■■■□□ 2.8
CDC16-210ENST00000494766 CHIC1Q5VXU3 224 aa32.55■■■□□ 2.8
CDC16-210ENST00000494766 ERCC6L2Q5T890 1561 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms