Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
LINC00242Q5T6M2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.84■□□□□ 0.13
LINC00242Q5T6M2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LINC00242Q5T6M2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.84■□□□□ 0.13
LINC00242Q5T6M2 MIR3648-2-201ENST00000581792 180 ntBASIC15.84■□□□□ 0.13
LINC00242Q5T6M2 MIR3648-1-201ENST00000615959 180 ntBASIC15.84■□□□□ 0.13
LINC00242Q5T6M2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.84■□□□□ 0.13
LINC00242Q5T6M2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
LINC00242Q5T6M2 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LINC00242Q5T6M2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LINC00242Q5T6M2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
LINC00242Q5T6M2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LINC00242Q5T6M2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
LINC00242Q5T6M2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LINC00242Q5T6M2 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00242Q5T6M2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00242Q5T6M2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.83■□□□□ 0.12
LINC00242Q5T6M2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
LINC00242Q5T6M2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00242Q5T6M2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LINC00242Q5T6M2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 AC060814.1-201ENST00000554326 538 ntBASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LINC00242Q5T6M2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 FOXO3B-201ENST00000395675 1928 ntBASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
LINC00242Q5T6M2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00242Q5T6M2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00242Q5T6M2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC15.8■□□□□ 0.12
LINC00242Q5T6M2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00242Q5T6M2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
LINC00242Q5T6M2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.8■□□□□ 0.12
LINC00242Q5T6M2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
LINC00242Q5T6M2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LINC00242Q5T6M2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 AL117328.2-201ENST00000624617 1940 ntBASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LINC00242Q5T6M2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LINC00242Q5T6M2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00242Q5T6M2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC00242Q5T6M2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LINC00242Q5T6M2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC15.78■□□□□ 0.12
LINC00242Q5T6M2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.78■□□□□ 0.12
LINC00242Q5T6M2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms