Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 SPO7YAL009W 780 nt4.34□□□□□ -1.71
SHH3Q04487 LYS21YDL131W 1323 nt4.34□□□□□ -1.71
SHH3Q04487 KIP2YPL155C 2121 nt4.34□□□□□ -1.71
SHH3Q04487 MDR1YGR100W 2853 nt4.33□□□□□ -1.72
SHH3Q04487 YDL144CYDL144C 1071 nt4.33□□□□□ -1.72
SHH3Q04487 RPT6YGL048C 1218 nt4.33□□□□□ -1.72
SHH3Q04487 PRE3YJL001W 648 nt4.33□□□□□ -1.72
SHH3Q04487 YJL107CYJL107C 1164 nt4.33□□□□□ -1.72
SHH3Q04487 YLR126CYLR126C 756 nt4.33□□□□□ -1.72
SHH3Q04487 YLR184WYLR184W 348 nt4.33□□□□□ -1.72
SHH3Q04487 MRP21YBL090W 534 nt4.33□□□□□ -1.72
SHH3Q04487 PDB1YBR221C 1101 nt4.33□□□□□ -1.72
SHH3Q04487 PEX29YDR479C 1665 nt4.32□□□□□ -1.72
SHH3Q04487 UGA1YGR019W 1416 nt4.32□□□□□ -1.72
SHH3Q04487 BRL1YHR036W 1416 nt4.32□□□□□ -1.72
SHH3Q04487 RPL34AYER056C-A 366 nt4.32□□□□□ -1.72
SHH3Q04487 TIF2YJL138C 1188 nt4.32□□□□□ -1.72
SHH3Q04487 TIF1YKR059W 1188 nt4.32□□□□□ -1.72
SHH3Q04487 SCO1YBR037C 888 nt4.32□□□□□ -1.72
SHH3Q04487 SIT1YEL065W 1887 nt4.32□□□□□ -1.72
SHH3Q04487 NUD1YOR373W 2556 nt4.32□□□□□ -1.72
SHH3Q04487 COX26YDR119W-A 201 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)CtN(GUU)C 74 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)FtN(GUU)F 74 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)GtN(GUU)G 74 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)KtN(GUU)K 74 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)LtN(GUU)L 74 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)N1tN(GUU)N1 74 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)N2tN(GUU)N2 74 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)O1tN(GUU)O1 74 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)O2tN(GUU)O2 74 nt4.31□□□□□ -1.72
SHH3Q04487 tN(GUU)PtN(GUU)P 74 nt4.31□□□□□ -1.72
SHH3Q04487 SNO4YMR322C 714 nt4.31□□□□□ -1.72
SHH3Q04487 HSP33YOR391C 714 nt4.31□□□□□ -1.72
SHH3Q04487 HSP32YPL280W 714 nt4.31□□□□□ -1.72
SHH3Q04487 FAA3YIL009W 2085 nt4.31□□□□□ -1.72
SHH3Q04487 KCH1YJR054W 1494 nt4.3□□□□□ -1.72
SHH3Q04487 TUL1YKL034W 2277 nt4.3□□□□□ -1.72
SHH3Q04487 ULA1YPL003W 1389 nt4.3□□□□□ -1.72
SHH3Q04487 YGR266WYGR266W 2106 nt4.3□□□□□ -1.72
SHH3Q04487 TUB3YML124C 1338 nt4.3□□□□□ -1.72
SHH3Q04487 YHR045WYHR045W 1683 nt4.3□□□□□ -1.72
SHH3Q04487 XPT1YJR133W 630 nt4.3□□□□□ -1.72
SHH3Q04487 YCL021W-AYCL021W-A 378 nt4.3□□□□□ -1.72
SHH3Q04487 PUS1YPL212C 1635 nt4.3□□□□□ -1.72
SHH3Q04487 YJL206CYJL206C 2277 nt4.3□□□□□ -1.72
SHH3Q04487 YMR155WYMR155W 1644 nt4.29□□□□□ -1.72
SHH3Q04487 HOT1YMR172W 2160 nt4.29□□□□□ -1.72
SHH3Q04487 AAD4YDL243C 990 nt4.29□□□□□ -1.72
SHH3Q04487 SUA5YGL169W 1281 nt4.29□□□□□ -1.72
SHH3Q04487 TEF4YKL081W 1239 nt4.29□□□□□ -1.72
SHH3Q04487 DOA1YKL213C 2148 nt4.29□□□□□ -1.72
SHH3Q04487 YPL113CYPL113C 1191 nt4.29□□□□□ -1.72
SHH3Q04487 FUM1YPL262W 1467 nt4.29□□□□□ -1.72
SHH3Q04487 AXL2YIL140W 2472 nt4.29□□□□□ -1.72
SHH3Q04487 YGR016WYGR016W 573 nt4.28□□□□□ -1.72
SHH3Q04487 FAF1YIL019W 1041 nt4.28□□□□□ -1.72
SHH3Q04487 CTS1YLR286C 1689 nt4.28□□□□□ -1.72
SHH3Q04487 ATG7YHR171W 1893 nt4.28□□□□□ -1.72
SHH3Q04487 CUE2YKL090W 1332 nt4.27□□□□□ -1.73
SHH3Q04487 ATG20YDL113C 1923 nt4.27□□□□□ -1.73
SHH3Q04487 YDL034WYDL034W 345 nt4.27□□□□□ -1.73
SHH3Q04487 AUA1YFL010W-A 285 nt4.27□□□□□ -1.73
SHH3Q04487 HSX1tR(CCU)J 72 nt4.27□□□□□ -1.73
SHH3Q04487 YLL059CYLL059C 507 nt4.27□□□□□ -1.73
SHH3Q04487 CTR3YLR411W 726 nt4.27□□□□□ -1.73
SHH3Q04487 LST8YNL006W 912 nt4.27□□□□□ -1.73
SHH3Q04487 ROX3YBL093C 663 nt4.27□□□□□ -1.73
SHH3Q04487 ISU2YOR226C 471 nt4.27□□□□□ -1.73
SHH3Q04487 PGM2YMR105C 1710 nt4.26□□□□□ -1.73
SHH3Q04487 ESF1YDR365C 1887 nt4.26□□□□□ -1.73
SHH3Q04487 STP4YDL048C 1473 nt4.26□□□□□ -1.73
SHH3Q04487 MSE1YOL033W 1611 nt4.26□□□□□ -1.73
SHH3Q04487 GAL83YER027C 1254 nt4.26□□□□□ -1.73
SHH3Q04487 RMR1YGL250W 726 nt4.26□□□□□ -1.73
SHH3Q04487 GTO1YGR154C 1071 nt4.26□□□□□ -1.73
SHH3Q04487 PCT1YGR202C 1275 nt4.26□□□□□ -1.73
SHH3Q04487 ARP1YHR129C 1155 nt4.26□□□□□ -1.73
SHH3Q04487 RMA1YKL132C 1293 nt4.26□□□□□ -1.73
SHH3Q04487 TFS1YLR178C 660 nt4.26□□□□□ -1.73
SHH3Q04487 ARR3YPR201W 1215 nt4.26□□□□□ -1.73
SHH3Q04487 snR19snR19 568 nt4.26□□□□□ -1.73
SHH3Q04487 VMA13YPR036W 1437 nt4.26□□□□□ -1.73
SHH3Q04487 PRO2YOR323C 1371 nt4.26□□□□□ -1.73
SHH3Q04487 RCK1YGL158W 1539 nt4.26□□□□□ -1.73
SHH3Q04487 VHS2YIL135C 1311 nt4.25□□□□□ -1.73
SHH3Q04487 MGS1YNL218W 1764 nt4.25□□□□□ -1.73
SHH3Q04487 YCR097W-AYCR097W-A 267 nt4.25□□□□□ -1.73
SHH3Q04487 YHL049CYHL049C 816 nt4.25□□□□□ -1.73
SHH3Q04487 snR17bsnR17b 332 nt4.25□□□□□ -1.73
SHH3Q04487 TOS4YLR183C 1470 nt4.24□□□□□ -1.73
SHH3Q04487 NSI1YDR026C 1713 nt4.24□□□□□ -1.73
SHH3Q04487 CAD1YDR423C 1230 nt4.24□□□□□ -1.73
SHH3Q04487 SEC18YBR080C 2277 nt4.24□□□□□ -1.73
SHH3Q04487 ARB1YER036C 1833 nt4.23□□□□□ -1.73
SHH3Q04487 ARO10YDR380W 1908 nt4.23□□□□□ -1.73
SHH3Q04487 SCW4YGR279C 1161 nt4.23□□□□□ -1.73
SHH3Q04487 COS9YKL219W 1224 nt4.23□□□□□ -1.73
SHH3Q04487 DOM34YNL001W 1161 nt4.23□□□□□ -1.73
SHH3Q04487 KDX1YKL161C 1302 nt4.22□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms