Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 MIR3960-201ENST00000583311 91 ntBASIC21.15■□□□□ 0.98
CDC42P60953 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CDC42P60953 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42P60953 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.15■□□□□ 0.98
CDC42P60953 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
CDC42P60953 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.14■□□□□ 0.97
CDC42P60953 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDC42P60953 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42P60953 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CDC42P60953 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42P60953 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42P60953 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.14■□□□□ 0.97
CDC42P60953 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42P60953 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.14■□□□□ 0.97
CDC42P60953 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42P60953 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42P60953 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42P60953 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CDC42P60953 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42P60953 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.13■□□□□ 0.97
CDC42P60953 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDC42P60953 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42P60953 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDC42P60953 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42P60953 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42P60953 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42P60953 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDC42P60953 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42P60953 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42P60953 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CDC42P60953 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42P60953 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
CDC42P60953 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42P60953 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42P60953 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42P60953 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42P60953 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42P60953 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42P60953 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42P60953 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC42P60953 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42P60953 AC025884.2-201ENST00000553429 711 ntBASIC21.11■□□□□ 0.97
CDC42P60953 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.11■□□□□ 0.97
CDC42P60953 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDC42P60953 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC42P60953 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42P60953 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.1■□□□□ 0.97
CDC42P60953 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.1■□□□□ 0.97
CDC42P60953 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42P60953 AL117328.2-201ENST00000624617 1940 ntBASIC21.1■□□□□ 0.97
CDC42P60953 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42P60953 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.1■□□□□ 0.97
CDC42P60953 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42P60953 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42P60953 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42P60953 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CDC42P60953 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42P60953 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42P60953 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42P60953 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDC42P60953 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42P60953 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.09■□□□□ 0.97
CDC42P60953 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDC42P60953 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.09■□□□□ 0.97
CDC42P60953 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CDC42P60953 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.08■□□□□ 0.97
CDC42P60953 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42P60953 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42P60953 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42P60953 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42P60953 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.08■□□□□ 0.97
CDC42P60953 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDC42P60953 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDC42P60953 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.08■□□□□ 0.96
CDC42P60953 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.08■□□□□ 0.96
CDC42P60953 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.08■□□□□ 0.96
CDC42P60953 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
CDC42P60953 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42P60953 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CDC42P60953 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42P60953 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42P60953 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42P60953 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42P60953 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42P60953 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42P60953 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42P60953 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42P60953 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.07■□□□□ 0.96
CDC42P60953 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42P60953 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDC42P60953 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42P60953 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42P60953 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42P60953 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42P60953 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
CDC42P60953 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.06■□□□□ 0.96
CDC42P60953 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42P60953 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDC42P60953 AL157400.5-201ENST00000507624 621 ntBASIC21.06■□□□□ 0.96
CDC42P60953 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms