Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMC4P56277 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.3■□□□□ 0.36
CMC4P56277 AC009299.2-201ENST00000482477 511 ntBASIC17.3■□□□□ 0.36
CMC4P56277 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.3■□□□□ 0.36
CMC4P56277 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.3■□□□□ 0.36
CMC4P56277 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CMC4P56277 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CMC4P56277 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMC4P56277 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMC4P56277 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CMC4P56277 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CMC4P56277 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CMC4P56277 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CMC4P56277 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMC4P56277 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMC4P56277 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.29■□□□□ 0.36
CMC4P56277 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.29■□□□□ 0.36
CMC4P56277 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.29■□□□□ 0.36
CMC4P56277 AL451085.2-201ENST00000605085 799 ntBASIC17.29■□□□□ 0.36
CMC4P56277 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CMC4P56277 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.29■□□□□ 0.36
CMC4P56277 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CMC4P56277 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.28■□□□□ 0.36
CMC4P56277 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.28■□□□□ 0.36
CMC4P56277 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC17.28■□□□□ 0.36
CMC4P56277 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CMC4P56277 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CMC4P56277 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.27■□□□□ 0.36
CMC4P56277 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMC4P56277 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CMC4P56277 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.27■□□□□ 0.36
CMC4P56277 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.27■□□□□ 0.36
CMC4P56277 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CMC4P56277 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CMC4P56277 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CMC4P56277 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CMC4P56277 AC021242.3-201ENST00000607598 1377 ntBASIC17.27■□□□□ 0.35
CMC4P56277 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CMC4P56277 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMC4P56277 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMC4P56277 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMC4P56277 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CMC4P56277 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.26■□□□□ 0.35
CMC4P56277 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CMC4P56277 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.26■□□□□ 0.35
CMC4P56277 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CMC4P56277 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.26■□□□□ 0.35
CMC4P56277 AC239859.2-201ENST00000444165 318 ntBASIC17.26■□□□□ 0.35
CMC4P56277 AL035685.1-201ENST00000636663 812 ntBASIC17.26■□□□□ 0.35
CMC4P56277 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.26■□□□□ 0.35
CMC4P56277 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CMC4P56277 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 AL022069.1-201ENST00000568025 1636 ntBASIC17.25■□□□□ 0.35
CMC4P56277 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CMC4P56277 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.25■□□□□ 0.35
CMC4P56277 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.24■□□□□ 0.35
CMC4P56277 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMC4P56277 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CMC4P56277 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMC4P56277 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.24■□□□□ 0.35
CMC4P56277 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMC4P56277 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CMC4P56277 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.24■□□□□ 0.35
CMC4P56277 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.24■□□□□ 0.35
CMC4P56277 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMC4P56277 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMC4P56277 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.24■□□□□ 0.35
CMC4P56277 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CMC4P56277 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.24■□□□□ 0.35
CMC4P56277 MIR4787-201ENST00000607364 84 ntBASIC17.24■□□□□ 0.35
CMC4P56277 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC17.24■□□□□ 0.35
CMC4P56277 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CMC4P56277 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.23■□□□□ 0.35
CMC4P56277 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMC4P56277 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMC4P56277 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CMC4P56277 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CMC4P56277 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMC4P56277 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.23■□□□□ 0.35
CMC4P56277 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.23■□□□□ 0.35
CMC4P56277 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMC4P56277 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.23■□□□□ 0.35
CMC4P56277 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMC4P56277 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CMC4P56277 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CMC4P56277 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.22■□□□□ 0.35
CMC4P56277 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.22■□□□□ 0.35
CMC4P56277 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.22■□□□□ 0.35
CMC4P56277 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
CMC4P56277 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CMC4P56277 AC141586.4-201ENST00000624558 1573 ntBASIC17.22■□□□□ 0.35
CMC4P56277 AF131216.4-201ENST00000638924 1588 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms