Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCR9P51686 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCR9P51686 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCR9P51686 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.38■□□□□ 0.85
CCR9P51686 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCR9P51686 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.38■□□□□ 0.85
CCR9P51686 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCR9P51686 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCR9P51686 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CCR9P51686 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCR9P51686 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
CCR9P51686 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCR9P51686 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCR9P51686 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCR9P51686 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
CCR9P51686 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCR9P51686 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCR9P51686 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCR9P51686 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CCR9P51686 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.35■□□□□ 0.85
CCR9P51686 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCR9P51686 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.35■□□□□ 0.85
CCR9P51686 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCR9P51686 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.35■□□□□ 0.85
CCR9P51686 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCR9P51686 AC026202.3-201ENST00000600805 1127 ntBASIC20.35■□□□□ 0.85
CCR9P51686 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.35■□□□□ 0.85
CCR9P51686 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.35■□□□□ 0.85
CCR9P51686 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CCR9P51686 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCR9P51686 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCR9P51686 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCR9P51686 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
CCR9P51686 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCR9P51686 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CCR9P51686 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCR9P51686 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCR9P51686 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.34■□□□□ 0.85
CCR9P51686 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCR9P51686 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCR9P51686 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCR9P51686 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CCR9P51686 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCR9P51686 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCR9P51686 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCR9P51686 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.33■□□□□ 0.85
CCR9P51686 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCR9P51686 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCR9P51686 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCR9P51686 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCR9P51686 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCR9P51686 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCR9P51686 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCR9P51686 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCR9P51686 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCR9P51686 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCR9P51686 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCR9P51686 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.32■□□□□ 0.84
CCR9P51686 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCR9P51686 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCR9P51686 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCR9P51686 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.31■□□□□ 0.84
CCR9P51686 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCR9P51686 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCR9P51686 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCR9P51686 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.31■□□□□ 0.84
CCR9P51686 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCR9P51686 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCR9P51686 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCR9P51686 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCR9P51686 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCR9P51686 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.3■□□□□ 0.84
CCR9P51686 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCR9P51686 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCR9P51686 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCR9P51686 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.3■□□□□ 0.84
CCR9P51686 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCR9P51686 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.3■□□□□ 0.84
CCR9P51686 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCR9P51686 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCR9P51686 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCR9P51686 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCR9P51686 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCR9P51686 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CCR9P51686 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCR9P51686 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCR9P51686 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.29■□□□□ 0.84
CCR9P51686 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCR9P51686 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.29■□□□□ 0.84
CCR9P51686 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCR9P51686 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCR9P51686 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCR9P51686 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCR9P51686 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.28■□□□□ 0.84
CCR9P51686 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCR9P51686 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCR9P51686 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCR9P51686 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.28■□□□□ 0.84
CCR9P51686 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCR9P51686 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms