Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RFC3P40938 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.22■□□□□ 0.99
RFC3P40938 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.22■□□□□ 0.99
RFC3P40938 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.22■□□□□ 0.99
RFC3P40938 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.21■□□□□ 0.99
RFC3P40938 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC3P40938 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC3P40938 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.21■□□□□ 0.99
RFC3P40938 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.21■□□□□ 0.99
RFC3P40938 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RFC3P40938 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RFC3P40938 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RFC3P40938 SLC6A10P-202ENST00000431994 2058 ntBASIC21.2■□□□□ 0.99
RFC3P40938 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC3P40938 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC3P40938 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.2■□□□□ 0.98
RFC3P40938 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC3P40938 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.2■□□□□ 0.98
RFC3P40938 MIR6724-1-201ENST00000616420 92 ntBASIC21.2■□□□□ 0.98
RFC3P40938 MIR6724-2-201ENST00000616483 92 ntBASIC21.2■□□□□ 0.98
RFC3P40938 MIR6724-4-201ENST00000617390 92 ntBASIC21.2■□□□□ 0.98
RFC3P40938 MIR6724-3-201ENST00000622482 92 ntBASIC21.2■□□□□ 0.98
RFC3P40938 AL117332.1-201ENST00000622628 974 ntBASIC21.2■□□□□ 0.98
RFC3P40938 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RFC3P40938 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RFC3P40938 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RFC3P40938 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RFC3P40938 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
RFC3P40938 AC145676.1-201ENST00000514988 2004 ntBASIC21.19■□□□□ 0.98
RFC3P40938 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC3P40938 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC3P40938 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC3P40938 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.19■□□□□ 0.98
RFC3P40938 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.19■□□□□ 0.98
RFC3P40938 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.19■□□□□ 0.98
RFC3P40938 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC3P40938 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
RFC3P40938 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFC3P40938 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.19■□□□□ 0.98
RFC3P40938 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RFC3P40938 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC3P40938 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFC3P40938 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
RFC3P40938 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RFC3P40938 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.18■□□□□ 0.98
RFC3P40938 AC131281.2-201ENST00000520478 145 ntBASIC21.18■□□□□ 0.98
RFC3P40938 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC3P40938 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC3P40938 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.18■□□□□ 0.98
RFC3P40938 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RFC3P40938 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFC3P40938 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RFC3P40938 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.17■□□□□ 0.98
RFC3P40938 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC3P40938 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC3P40938 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC3P40938 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC3P40938 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.17■□□□□ 0.98
RFC3P40938 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.17■□□□□ 0.98
RFC3P40938 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.17■□□□□ 0.98
RFC3P40938 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.17■□□□□ 0.98
RFC3P40938 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC3P40938 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.17■□□□□ 0.98
RFC3P40938 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.17■□□□□ 0.98
RFC3P40938 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFC3P40938 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFC3P40938 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFC3P40938 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFC3P40938 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RFC3P40938 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.16■□□□□ 0.98
RFC3P40938 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RFC3P40938 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFC3P40938 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC3P40938 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.16■□□□□ 0.98
RFC3P40938 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFC3P40938 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFC3P40938 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC3P40938 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC3P40938 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC3P40938 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC3P40938 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC3P40938 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.15■□□□□ 0.98
RFC3P40938 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.15■□□□□ 0.98
RFC3P40938 SNX5-217ENST00000606557 1087 ntBASIC21.15■□□□□ 0.98
RFC3P40938 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFC3P40938 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
RFC3P40938 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RFC3P40938 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RFC3P40938 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.14■□□□□ 0.97
RFC3P40938 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.14■□□□□ 0.97
RFC3P40938 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RFC3P40938 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC3P40938 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RFC3P40938 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RFC3P40938 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.13■□□□□ 0.97
RFC3P40938 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.13■□□□□ 0.97
RFC3P40938 AL136116.3-201ENST00000402907 1138 ntBASIC21.13■□□□□ 0.97
RFC3P40938 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.13■□□□□ 0.97
RFC3P40938 MIR3621-201ENST00000580529 85 ntBASIC21.13■□□□□ 0.97
RFC3P40938 AL356740.2-201ENST00000601559 647 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms