Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 tN(GUU)GtN(GUU)G 74 nt5.04□□□□□ -1.6
VPS52P39904 tN(GUU)KtN(GUU)K 74 nt5.04□□□□□ -1.6
VPS52P39904 tN(GUU)LtN(GUU)L 74 nt5.04□□□□□ -1.6
VPS52P39904 tN(GUU)N1tN(GUU)N1 74 nt5.04□□□□□ -1.6
VPS52P39904 tN(GUU)N2tN(GUU)N2 74 nt5.04□□□□□ -1.6
VPS52P39904 tN(GUU)O1tN(GUU)O1 74 nt5.04□□□□□ -1.6
VPS52P39904 tN(GUU)O2tN(GUU)O2 74 nt5.04□□□□□ -1.6
VPS52P39904 tN(GUU)PtN(GUU)P 74 nt5.04□□□□□ -1.6
VPS52P39904 YKL151CYKL151C 1014 nt5.04□□□□□ -1.6
VPS52P39904 YDR132CYDR132C 1488 nt5.04□□□□□ -1.6
VPS52P39904 TEA1YOR337W 2280 nt5.04□□□□□ -1.6
VPS52P39904 GDB1YPR184W 4611 nt5.04□□□□□ -1.6
VPS52P39904 BNA5YLR231C 1362 nt5.04□□□□□ -1.6
VPS52P39904 SHE10YGL228W 1734 nt5.03□□□□□ -1.6
VPS52P39904 CLP1YOR250C 1338 nt5.03□□□□□ -1.6
VPS52P39904 SOG2YOR353C 2376 nt5.03□□□□□ -1.6
VPS52P39904 YDL034WYDL034W 345 nt5.03□□□□□ -1.6
VPS52P39904 YJL193WYJL193W 1209 nt5.03□□□□□ -1.6
VPS52P39904 COS9YKL219W 1224 nt5.03□□□□□ -1.6
VPS52P39904 MRPL13YKR006C 795 nt5.03□□□□□ -1.6
VPS52P39904 SUE1YPR151C 621 nt5.03□□□□□ -1.6
VPS52P39904 PDB1YBR221C 1101 nt5.03□□□□□ -1.6
VPS52P39904 ASH1YKL185W 1767 nt5.03□□□□□ -1.6
VPS52P39904 TAX4YJL083W 1815 nt5.02□□□□□ -1.61
VPS52P39904 VPS1YKR001C 2115 nt5.02□□□□□ -1.61
VPS52P39904 ARP10YDR106W 855 nt5.02□□□□□ -1.61
VPS52P39904 RTT103YDR289C 1230 nt5.02□□□□□ -1.61
VPS52P39904 YHP1YDR451C 1062 nt5.02□□□□□ -1.61
VPS52P39904 VAM7YGL212W 951 nt5.02□□□□□ -1.61
VPS52P39904 MRPL25YGR076C 474 nt5.02□□□□□ -1.61
VPS52P39904 VMA16YHR026W 642 nt5.02□□□□□ -1.61
VPS52P39904 GON7YJL184W 372 nt5.02□□□□□ -1.61
VPS52P39904 APN1YKL114C 1104 nt5.02□□□□□ -1.61
VPS52P39904 RHO2YNL090W 579 nt5.02□□□□□ -1.61
VPS52P39904 RET1YOR207C 3450 nt5.02□□□□□ -1.61
VPS52P39904 LPL1YOR059C 1353 nt5.02□□□□□ -1.61
VPS52P39904 TEF1YPR080W 1377 nt5.02□□□□□ -1.61
VPS52P39904 TEF2YBR118W 1377 nt5.02□□□□□ -1.61
VPS52P39904 PIF1YML061C 2580 nt5.02□□□□□ -1.61
VPS52P39904 RKM4YDR257C 1485 nt5.01□□□□□ -1.61
VPS52P39904 CLD1YGR110W 1338 nt5.01□□□□□ -1.61
VPS52P39904 ADE13YLR359W 1449 nt5.01□□□□□ -1.61
VPS52P39904 PCL6YER059W 1263 nt5.01□□□□□ -1.61
VPS52P39904 BMT5YIL096C 1011 nt5.01□□□□□ -1.61
VPS52P39904 RHO3YIL118W 696 nt5.01□□□□□ -1.61
VPS52P39904 SFC1YJR095W 969 nt5.01□□□□□ -1.61
VPS52P39904 GEP3YOR205C 1671 nt5.01□□□□□ -1.61
VPS52P39904 MMR1YLR190W 1476 nt5□□□□□ -1.61
VPS52P39904 RBA50YDR527W 1320 nt5□□□□□ -1.61
VPS52P39904 SPO77YLR341W 1434 nt5□□□□□ -1.61
VPS52P39904 UTP7YER082C 1665 nt5□□□□□ -1.61
VPS52P39904 RAM1YDL090C 1296 nt5□□□□□ -1.61
VPS52P39904 MHR1YDR296W 681 nt5□□□□□ -1.61
VPS52P39904 SLO1YER180C-A 258 nt5□□□□□ -1.61
VPS52P39904 YFR052C-AYFR052C-A 306 nt5□□□□□ -1.61
VPS52P39904 YKR075CYKR075C 924 nt5□□□□□ -1.61
VPS52P39904 SEC17YBL050W 879 nt5□□□□□ -1.61
VPS52P39904 UBC4YBR082C 447 nt5□□□□□ -1.61
VPS52P39904 YPR195CYPR195C 330 nt5□□□□□ -1.61
VPS52P39904 WTM1YOR230W 1314 nt4.99□□□□□ -1.61
VPS52P39904 RPT1YKL145W 1404 nt4.99□□□□□ -1.61
VPS52P39904 SCW4YGR279C 1161 nt4.99□□□□□ -1.61
VPS52P39904 KRE9YJL174W 831 nt4.99□□□□□ -1.61
VPS52P39904 DBR1YKL149C 1218 nt4.99□□□□□ -1.61
VPS52P39904 HOR7YMR251W-A 180 nt4.99□□□□□ -1.61
VPS52P39904 RRT2YBR246W 1164 nt4.99□□□□□ -1.61
VPS52P39904 HMLALPHA1YCL066W 528 nt4.98□□□□□ -1.61
VPS52P39904 MATALPHA1YCR040W 528 nt4.98□□□□□ -1.61
VPS52P39904 PHO86YJL117W 936 nt4.98□□□□□ -1.61
VPS52P39904 PEX12YMR026C 1200 nt4.98□□□□□ -1.61
VPS52P39904 YET2YMR040W 483 nt4.98□□□□□ -1.61
VPS52P39904 PSH1YOL054W 1221 nt4.98□□□□□ -1.61
VPS52P39904 snR32snR32 188 nt4.98□□□□□ -1.61
VPS52P39904 YCL041CYCL041C 495 nt4.98□□□□□ -1.61
VPS52P39904 ACF2YLR144C 2340 nt4.98□□□□□ -1.61
VPS52P39904 MNN2YBR015C 1794 nt4.98□□□□□ -1.61
VPS52P39904 RFA1YAR007C 1866 nt4.98□□□□□ -1.61
VPS52P39904 ISR1YPR106W 1332 nt4.97□□□□□ -1.61
VPS52P39904 BAP2YBR068C 1830 nt4.97□□□□□ -1.61
VPS52P39904 MMP1YLL061W 1752 nt4.97□□□□□ -1.61
VPS52P39904 HER2YMR293C 1395 nt4.97□□□□□ -1.61
VPS52P39904 HEM3YDL205C 984 nt4.97□□□□□ -1.61
VPS52P39904 ARP1YHR129C 1155 nt4.97□□□□□ -1.61
VPS52P39904 YIL060WYIL060W 435 nt4.97□□□□□ -1.61
VPS52P39904 PML1YLR016C 615 nt4.97□□□□□ -1.61
VPS52P39904 YNL234WYNL234W 1281 nt4.97□□□□□ -1.61
VPS52P39904 PPR1YLR014C 2715 nt4.97□□□□□ -1.61
VPS52P39904 VAN1YML115C 1608 nt4.97□□□□□ -1.61
VPS52P39904 YJR015WYJR015W 1533 nt4.97□□□□□ -1.61
VPS52P39904 VTC2YFL004W 2487 nt4.97□□□□□ -1.61
VPS52P39904 TOS4YLR183C 1470 nt4.96□□□□□ -1.62
VPS52P39904 NOB1YOR056C 1380 nt4.96□□□□□ -1.62
VPS52P39904 UPS3YDR185C 540 nt4.96□□□□□ -1.62
VPS52P39904 PRO3YER023W 861 nt4.96□□□□□ -1.62
VPS52P39904 AAD6YFL056C 639 nt4.96□□□□□ -1.62
VPS52P39904 RPT6YGL048C 1218 nt4.96□□□□□ -1.62
VPS52P39904 YGL194C-AYGL194C-A 243 nt4.96□□□□□ -1.62
VPS52P39904 PRM10YJL108C 1152 nt4.96□□□□□ -1.62
VPS52P39904 ERG3YLR056W 1098 nt4.96□□□□□ -1.62
VPS52P39904 YOR318CYOR318C 306 nt4.96□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 69.5 ms