Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 HOR7YMR251W-A 180 nt7.79□□□□□ -1.16
UFD4P33202 YNL174WYNL174W 573 nt7.79□□□□□ -1.16
UFD4P33202 LEM3YNL323W 1245 nt7.79□□□□□ -1.16
UFD4P33202 ACS1YAL054C 2142 nt7.78□□□□□ -1.16
UFD4P33202 RIM101YHL027W 1878 nt7.78□□□□□ -1.16
UFD4P33202 YLR157W-DYLR157W-D 213 nt7.78□□□□□ -1.16
UFD4P33202 MDG1YNL173C 1101 nt7.78□□□□□ -1.16
UFD4P33202 SKI2YLR398C 3864 nt7.78□□□□□ -1.16
UFD4P33202 ECM3YOR092W 1842 nt7.78□□□□□ -1.16
UFD4P33202 KTI12YKL110C 942 nt7.77□□□□□ -1.17
UFD4P33202 YCR061WYCR061W 1896 nt7.77□□□□□ -1.17
UFD4P33202 RCK1YGL158W 1539 nt7.77□□□□□ -1.17
UFD4P33202 SFB3YHR098C 2790 nt7.76□□□□□ -1.17
UFD4P33202 HXT4YHR092C 1731 nt7.76□□□□□ -1.17
UFD4P33202 HEM3YDL205C 984 nt7.76□□□□□ -1.17
UFD4P33202 GLO2YDR272W 825 nt7.76□□□□□ -1.17
UFD4P33202 SWI3YJL176C 2478 nt7.76□□□□□ -1.17
UFD4P33202 AZR1YGR224W 1842 nt7.76□□□□□ -1.17
UFD4P33202 YMR027WYMR027W 1413 nt7.76□□□□□ -1.17
UFD4P33202 SCW10YMR305C 1170 nt7.75□□□□□ -1.17
UFD4P33202 FOL1YNL256W 2475 nt7.75□□□□□ -1.17
UFD4P33202 TNA1YGR260W 1605 nt7.75□□□□□ -1.17
UFD4P33202 PDI1YCL043C 1569 nt7.75□□□□□ -1.17
UFD4P33202 FUN19YAL034C 1242 nt7.75□□□□□ -1.17
UFD4P33202 RPL15BYMR121C 615 nt7.75□□□□□ -1.17
UFD4P33202 YPL199CYPL199C 723 nt7.75□□□□□ -1.17
UFD4P33202 CLP1YOR250C 1338 nt7.74□□□□□ -1.17
UFD4P33202 TRP3YKL211C 1455 nt7.74□□□□□ -1.17
UFD4P33202 NMA1YLR328W 1206 nt7.74□□□□□ -1.17
UFD4P33202 YBL070CYBL070C 321 nt7.74□□□□□ -1.17
UFD4P33202 PCL1YNL289W 840 nt7.74□□□□□ -1.17
UFD4P33202 UGA2YBR006W 1494 nt7.73□□□□□ -1.17
UFD4P33202 HXT2YMR011W 1626 nt7.73□□□□□ -1.17
UFD4P33202 GSY2YLR258W 2118 nt7.72□□□□□ -1.17
UFD4P33202 VCX1YDL128W 1236 nt7.72□□□□□ -1.17
UFD4P33202 CTR2YHR175W 570 nt7.72□□□□□ -1.17
UFD4P33202 YKL223WYKL223W 333 nt7.72□□□□□ -1.17
UFD4P33202 ATG22YCL038C 1587 nt7.72□□□□□ -1.17
UFD4P33202 FUI1YBL042C 1920 nt7.72□□□□□ -1.17
UFD4P33202 BUD9YGR041W 1644 nt7.71□□□□□ -1.17
UFD4P33202 PDR18YNR070W 4002 nt7.71□□□□□ -1.18
UFD4P33202 SPR6YER115C 576 nt7.71□□□□□ -1.18
UFD4P33202 tL(UAG)JtL(UAG)J 82 nt7.71□□□□□ -1.18
UFD4P33202 tL(UAG)L1tL(UAG)L1 82 nt7.71□□□□□ -1.18
UFD4P33202 tL(UAG)L2tL(UAG)L2 82 nt7.71□□□□□ -1.18
UFD4P33202 YML101C-AYML101C-A 318 nt7.71□□□□□ -1.18
UFD4P33202 RFA1YAR007C 1866 nt7.71□□□□□ -1.18
UFD4P33202 CDC43YGL155W 1131 nt7.7□□□□□ -1.18
UFD4P33202 IDP3YNL009W 1263 nt7.7□□□□□ -1.18
UFD4P33202 MMT2YPL224C 1455 nt7.7□□□□□ -1.18
UFD4P33202 RET1YOR207C 3450 nt7.69□□□□□ -1.18
UFD4P33202 RFU1YLR073C 603 nt7.69□□□□□ -1.18
UFD4P33202 MRPL15YLR312W-A 762 nt7.69□□□□□ -1.18
UFD4P33202 ECM23YPL021W 564 nt7.69□□□□□ -1.18
UFD4P33202 EFT2YDR385W 2529 nt7.69□□□□□ -1.18
UFD4P33202 EFT1YOR133W 2529 nt7.69□□□□□ -1.18
UFD4P33202 CEG1YGL130W 1380 nt7.69□□□□□ -1.18
UFD4P33202 TRM10YOL093W 882 nt7.68□□□□□ -1.18
UFD4P33202 TOS2YGR221C 1869 nt7.68□□□□□ -1.18
UFD4P33202 EPS1YIL005W 2106 nt7.68□□□□□ -1.18
UFD4P33202 YOR024WYOR024W 324 nt7.68□□□□□ -1.18
UFD4P33202 FRT2YAL028W 1587 nt7.67□□□□□ -1.18
UFD4P33202 TIP41YPR040W 1071 nt7.67□□□□□ -1.18
UFD4P33202 YML057C-AYML057C-A 390 nt7.66□□□□□ -1.18
UFD4P33202 MAG2YLR427W 2013 nt7.65□□□□□ -1.18
UFD4P33202 IWR1YDL115C 1062 nt7.65□□□□□ -1.18
UFD4P33202 CIA2YHR122W 696 nt7.65□□□□□ -1.18
UFD4P33202 YNL181WYNL181W 1224 nt7.65□□□□□ -1.18
UFD4P33202 CIN5YOR028C 888 nt7.65□□□□□ -1.18
UFD4P33202 NPT1YOR209C 1290 nt7.65□□□□□ -1.18
UFD4P33202 SSH4YKL124W 1740 nt7.65□□□□□ -1.19
UFD4P33202 YBR284WYBR284W 2394 nt7.64□□□□□ -1.19
UFD4P33202 MTW1YAL034W-A 870 nt7.64□□□□□ -1.19
UFD4P33202 SPG4YMR107W 348 nt7.64□□□□□ -1.19
UFD4P33202 FOX2YKR009C 2703 nt7.64□□□□□ -1.19
UFD4P33202 ALD3YMR169C 1521 nt7.64□□□□□ -1.19
UFD4P33202 ALD2YMR170C 1521 nt7.64□□□□□ -1.19
UFD4P33202 SUP56tL(CAA)A 82 nt7.63□□□□□ -1.19
UFD4P33202 SUP53tL(CAA)C 82 nt7.63□□□□□ -1.19
UFD4P33202 tL(CAA)DtL(CAA)D 82 nt7.63□□□□□ -1.19
UFD4P33202 tL(CAA)G1tL(CAA)G1 82 nt7.63□□□□□ -1.19
UFD4P33202 SUP54tL(CAA)G2 82 nt7.63□□□□□ -1.19
UFD4P33202 tL(CAA)G3tL(CAA)G3 82 nt7.63□□□□□ -1.19
UFD4P33202 tL(CAA)KtL(CAA)K 82 nt7.63□□□□□ -1.19
UFD4P33202 tL(CAA)LtL(CAA)L 82 nt7.63□□□□□ -1.19
UFD4P33202 tL(CAA)MtL(CAA)M 82 nt7.63□□□□□ -1.19
UFD4P33202 tL(CAA)NtL(CAA)N 82 nt7.63□□□□□ -1.19
UFD4P33202 SUT1YGL162W 900 nt7.63□□□□□ -1.19
UFD4P33202 PDC1YLR044C 1692 nt7.63□□□□□ -1.19
UFD4P33202 BRF1YGR246C 1791 nt7.63□□□□□ -1.19
UFD4P33202 AVO1YOL078W 3531 nt7.63□□□□□ -1.19
UFD4P33202 UBC8YEL012W 657 nt7.62□□□□□ -1.19
UFD4P33202 NMD4YLR363C 657 nt7.62□□□□□ -1.19
UFD4P33202 ARF2YDL137W 546 nt7.62□□□□□ -1.19
UFD4P33202 RPA49YNL248C 1248 nt7.62□□□□□ -1.19
UFD4P33202 ATR1YML116W 1629 nt7.61□□□□□ -1.19
UFD4P33202 SED4YCR067C 3198 nt7.61□□□□□ -1.19
UFD4P33202 NGR1YBR212W 2019 nt7.6□□□□□ -1.19
UFD4P33202 CTS1YLR286C 1689 nt7.6□□□□□ -1.19
UFD4P33202 THI5YFL058W 1023 nt7.59□□□□□ -1.19
Retrieved 100 of 7,029 protein–RNA pairs in 106 ms