Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 tC(GCA)QtC(GCA)Q 76 nt-7.28□□□□□ -3.57
UFD4P33202 snR64snR64 101 nt-7.49□□□□□ -3.61
UFD4P33202 YOR225WYOR225W 330 nt-7.55□□□□□ -3.62
UFD4P33202 YOR231C-AYOR231C-A 201 nt-7.55□□□□□ -3.62
UFD4P33202 YLR294CYLR294C 330 nt-7.65□□□□□ -3.63
UFD4P33202 snR62snR62 100 nt-7.66□□□□□ -3.64
UFD4P33202 VAR1Q0140 1197 nt-7.73□□□□□ -3.65
UFD4P33202 YGL041C-BYGL041C-B 183 nt-7.8□□□□□ -3.66
UFD4P33202 snR40snR40 97 nt-7.87□□□□□ -3.67
UFD4P33202 YMR046W-AYMR046W-A 129 nt-7.88□□□□□ -3.67
UFD4P33202 snR61snR61 90 nt-8.12□□□□□ -3.71
UFD4P33202 YNL103W-AYNL103W-A 90 nt-8.22□□□□□ -3.73
UFD4P33202 YLR466C-BYLR466C-B 117 nt-8.38□□□□□ -3.75
UFD4P33202 YLR149C-AYLR149C-A 87 nt-8.46□□□□□ -3.76
UFD4P33202 YNL338WYNL338W 159 nt-8.51□□□□□ -3.77
UFD4P33202 Q0143Q0143 153 nt-8.53□□□□□ -3.78
UFD4P33202 snR53snR53 91 nt-8.67□□□□□ -3.8
UFD4P33202 tM(CAU)Q1tM(CAU)Q1 76 nt-8.7□□□□□ -3.8
UFD4P33202 tR(ACG)Q2tR(ACG)Q2 74 nt-8.7□□□□□ -3.8
UFD4P33202 Q0032Q0032 291 nt-8.89□□□□□ -3.83
UFD4P33202 YLL066W-BYLL066W-B 171 nt-9.41□□□□□ -3.92
UFD4P33202 YMR326CYMR326C 309 nt-9.5□□□□□ -3.93
UFD4P33202 YHR217CYHR217C 462 nt-9.98□□□□□ -4.01
UFD4P33202 Q0144Q0144 330 nt-10.2□□□□□ -4.04
UFD4P33202 snR75snR75 89 nt-11.09□□□□□ -4.18
UFD4P33202 ATP8Q0080 147 nt-11.11□□□□□ -4.19
UFD4P33202 YBL109WYBL109W 336 nt-11.32□□□□□ -4.22
UFD4P33202 YDL247W-AYDL247W-A 75 nt-11.37□□□□□ -4.23
UFD4P33202 Q0092Q0092 141 nt-12.62□□□□□ -4.43
Retrieved 29 of 7,029 protein–RNA pairs in 3.4 ms