RNA–Protein interactions for RNA: YPR040W

TIP41, Transcript of Protein that interacts with Tap42p, which regulates PP2A, yeastyeast

Gene TIP41, Length 1,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIP41YPR040W DRS1P32892 752 aaKnown RBP15.58■□□□□ 0.08
TIP41YPR040W MTC1P47018 478 aaKnown RBP14.86□□□□□ -0.03
TIP41YPR040W BFR2Q06631 534 aaKnown RBP13.73□□□□□ -0.21
TIP41YPR040W TFA1P36100 482 aa13.24□□□□□ -0.29
TIP41YPR040W DIP2Q12220 943 aaPredicted RBP13.05□□□□□ -0.32
TIP41YPR040W AVT3P36062 692 aa12.98□□□□□ -0.33
TIP41YPR040W RSE1Q04693 1361 aaKnown RBP12.15□□□□□ -0.46
TIP41YPR040W ISW2Q08773 1120 aa11.99□□□□□ -0.49
TIP41YPR040W RQC2Q12532 1038 aaKnown RBP11.87□□□□□ -0.51
TIP41YPR040W RPG1P38249 964 aaKnown RBP11.83□□□□□ -0.52
TIP41YPR040W RPL17AP05740 184 aaKnown RBP11.68□□□□□ -0.54
TIP41YPR040W RPL17BP46990 184 aaKnown RBP11.68□□□□□ -0.54
TIP41YPR040W FAP1P53971 965 aa11.65□□□□□ -0.54
TIP41YPR040W PRI1P10363 409 aa11.6□□□□□ -0.55
TIP41YPR040W REB1P21538 810 aa11.5□□□□□ -0.57
TIP41YPR040W AAD16Q02895 342 aa11.34□□□□□ -0.59
TIP41YPR040W PTP3P40048 928 aa11.29□□□□□ -0.6
TIP41YPR040W DMA1P38823 416 aa11.21□□□□□ -0.61
TIP41YPR040W RIM101P33400 625 aa11.2□□□□□ -0.62
TIP41YPR040W SPT21P35209 758 aa11.2□□□□□ -0.62
TIP41YPR040W TSR3Q12094 313 aaKnown RBP11.12□□□□□ -0.63
TIP41YPR040W SSP1P38871 571 aa11□□□□□ -0.65
TIP41YPR040W YAH1Q12184 172 aaKnown RBP10.9□□□□□ -0.66
TIP41YPR040W OXP1P28273 1286 aa10.89□□□□□ -0.67
TIP41YPR040W PRY3P47033 881 aa10.85□□□□□ -0.67
TIP41YPR040W YIL055CP40523 627 aaKnown RBP10.81□□□□□ -0.68
TIP41YPR040W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.78□□□□□ -0.68not detected
TIP41YPR040W YKR023WP36119 530 aaKnown RBP10.75□□□□□ -0.69
TIP41YPR040W YLR271WQ06152 274 aa10.7□□□□□ -0.7
TIP41YPR040W MRPL32P25348 183 aa10.66□□□□□ -0.7
TIP41YPR040W HOP09932 586 aa10.59□□□□□ -0.71
TIP41YPR040W RSM7P47150 247 aa10.58□□□□□ -0.72
TIP41YPR040W MGA2P40578 1113 aa10.53□□□□□ -0.72
TIP41YPR040W TFC8Q12308 588 aa10.53□□□□□ -0.72
TIP41YPR040W DCD1P06773 312 aa10.51□□□□□ -0.73
TIP41YPR040W TAF7Q05021 590 aa10.45□□□□□ -0.74
TIP41YPR040W CST9Q06032 482 aa10.42□□□□□ -0.74
TIP41YPR040W LEO1P38439 464 aa10.41□□□□□ -0.74
TIP41YPR040W CDC27P38042 758 aa10.39□□□□□ -0.75
TIP41YPR040W AI2P03876 854 aa10.37□□□□□ -0.75
TIP41YPR040W PSD2P53037 1138 aaKnown RBP10.32□□□□□ -0.76
TIP41YPR040W SAS10Q12136 610 aaPredicted RBP10.31□□□□□ -0.76
TIP41YPR040W BCH2P36122 765 aa10.27□□□□□ -0.77
TIP41YPR040W BBC1P47068 1157 aa10.27□□□□□ -0.77
TIP41YPR040W HAA1Q12753 694 aaKnown RBP10.21□□□□□ -0.77
TIP41YPR040W LEU3P08638 886 aa10.18□□□□□ -0.78
TIP41YPR040W YCK3P39962 524 aa10.18□□□□□ -0.78
TIP41YPR040W EPS1P40557 701 aa10.14□□□□□ -0.79
TIP41YPR040W MRM1P25270 412 aa10.1□□□□□ -0.79
TIP41YPR040W RAM2P29703 316 aa10.09□□□□□ -0.79
TIP41YPR040W BDF1P35817 686 aa10.05□□□□□ -0.8
TIP41YPR040W SET1P38827 1080 aaKnown RBP10.03□□□□□ -0.8
TIP41YPR040W RCR1P38212 213 aa10.02□□□□□ -0.81
TIP41YPR040W SCY1P53009 804 aa10.01□□□□□ -0.81
TIP41YPR040W RTG3P38165 486 aa9.98□□□□□ -0.81
TIP41YPR040W SPB4P25808 606 aaPredicted RBP9.96□□□□□ -0.82
TIP41YPR040W VPS70P47161 811 aa9.95□□□□□ -0.82
TIP41YPR040W RPN1P38764 993 aaKnown RBP9.92□□□□□ -0.82
TIP41YPR040W MAP2P38174 421 aaKnown RBP9.89□□□□□ -0.83
TIP41YPR040W CKB1P43639 278 aa9.89□□□□□ -0.83
TIP41YPR040W MAK11P20484 414 aaKnown RBP9.87□□□□□ -0.83
TIP41YPR040W IFH1P39520 1085 aa9.87□□□□□ -0.83
TIP41YPR040W YPR148CQ06523 435 aa9.87□□□□□ -0.83
TIP41YPR040W UBP10P53874 792 aaPredicted RBP9.84□□□□□ -0.83
TIP41YPR040W VPS29P38759 282 aa9.79□□□□□ -0.84
TIP41YPR040W DMA2P53924 522 aa9.78□□□□□ -0.84
TIP41YPR040W COQ8P27697 501 aa9.76□□□□□ -0.85
TIP41YPR040W SLX5P32828 619 aaKnown RBP9.76□□□□□ -0.85
TIP41YPR040W YGL015CP33199 130 aa9.75□□□□□ -0.85
TIP41YPR040W PBS2P08018 668 aa9.72□□□□□ -0.85
TIP41YPR040W MIF2P35201 549 aa9.71□□□□□ -0.86
TIP41YPR040W YMR1P47147 688 aaKnown RBP RIP-Chip data9.69□□□□□ -0.86not detected
TIP41YPR040W DSF2P38213 736 aa9.67□□□□□ -0.86
TIP41YPR040W MON2P48563 1636 aaPredicted RBP9.67□□□□□ -0.86
TIP41YPR040W YFR006WP43590 535 aa9.66□□□□□ -0.86
TIP41YPR040W INO80P53115 1489 aa9.66□□□□□ -0.86
TIP41YPR040W STS1P38637 319 aa9.64□□□□□ -0.87
TIP41YPR040W DBP1P24784 617 aaKnown RBP9.63□□□□□ -0.87
TIP41YPR040W EDS1P38073 919 aa9.6□□□□□ -0.87
TIP41YPR040W NOP53Q12080 455 aaKnown RBP9.6□□□□□ -0.87
TIP41YPR040W REF2P42073 533 aaPredicted RBP9.58□□□□□ -0.88
TIP41YPR040W MAM3Q12296 706 aa9.58□□□□□ -0.88
TIP41YPR040W YOR238WQ08634 303 aa9.57□□□□□ -0.88
TIP41YPR040W YNR021WP53723 404 aaKnown RBP9.56□□□□□ -0.88
TIP41YPR040W KIN1P13185 1064 aa9.54□□□□□ -0.88
TIP41YPR040W IES2P40154 320 aa9.53□□□□□ -0.88
TIP41YPR040W GLC3P32775 704 aa9.52□□□□□ -0.89
TIP41YPR040W PTC3P34221 468 aaKnown RBP9.51□□□□□ -0.89
TIP41YPR040W PIB1Q06651 286 aa9.51□□□□□ -0.89
TIP41YPR040W DIT2P21595 489 aa9.48□□□□□ -0.89
TIP41YPR040W TIF4632P39936 914 aaKnown RBP9.48□□□□□ -0.89
TIP41YPR040W NUP42P49686 430 aaKnown RBP9.45□□□□□ -0.9
TIP41YPR040W AIM7Q12156 149 aa9.44□□□□□ -0.9
TIP41YPR040W RLF2Q12495 606 aa9.44□□□□□ -0.9
TIP41YPR040W COX6P00427 148 aa9.43□□□□□ -0.9
TIP41YPR040W YAP5P40574 245 aa9.43□□□□□ -0.9
TIP41YPR040W MAK21Q12176 1025 aaKnown RBP9.43□□□□□ -0.9
TIP41YPR040W ABP1P15891 592 aaKnown RBP9.4□□□□□ -0.9
TIP41YPR040W ATF2P53296 535 aa9.39□□□□□ -0.91
TIP41YPR040W VMA1P17255 1071 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms