Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TCRAP04437 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.62■□□□□ 0.41
TCRAP04437 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRAP04437 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.62■□□□□ 0.41
TCRAP04437 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRAP04437 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
TCRAP04437 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TCRAP04437 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TCRAP04437 ZNRF2P2-203ENST00000454624 420 ntBASIC17.62■□□□□ 0.41
TCRAP04437 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRAP04437 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TCRAP04437 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.62■□□□□ 0.41
TCRAP04437 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRAP04437 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRAP04437 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TCRAP04437 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.61■□□□□ 0.41
TCRAP04437 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TCRAP04437 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRAP04437 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRAP04437 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRAP04437 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TCRAP04437 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TCRAP04437 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TCRAP04437 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
TCRAP04437 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.6■□□□□ 0.41
TCRAP04437 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRAP04437 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRAP04437 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.6■□□□□ 0.41
TCRAP04437 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRAP04437 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.6■□□□□ 0.41
TCRAP04437 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TCRAP04437 AL117328.2-201ENST00000624617 1940 ntBASIC17.59■□□□□ 0.41
TCRAP04437 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRAP04437 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRAP04437 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TCRAP04437 RPS2P35-201ENST00000443417 897 ntBASIC17.59■□□□□ 0.41
TCRAP04437 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.59■□□□□ 0.41
TCRAP04437 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.59■□□□□ 0.41
TCRAP04437 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRAP04437 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TCRAP04437 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TCRAP04437 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TCRAP04437 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TCRAP04437 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
TCRAP04437 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TCRAP04437 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRAP04437 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRAP04437 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRAP04437 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRAP04437 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TCRAP04437 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.58■□□□□ 0.4
TCRAP04437 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.58■□□□□ 0.4
TCRAP04437 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.58■□□□□ 0.4
TCRAP04437 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRAP04437 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TCRAP04437 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.58■□□□□ 0.4
TCRAP04437 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRAP04437 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TCRAP04437 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRAP04437 SMPD5-203ENST00000639008 1464 ntBASIC17.57■□□□□ 0.4
TCRAP04437 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRAP04437 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TCRAP04437 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TCRAP04437 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRAP04437 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.57■□□□□ 0.4
TCRAP04437 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRAP04437 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRAP04437 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TCRAP04437 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRAP04437 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRAP04437 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TCRAP04437 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TCRAP04437 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TCRAP04437 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TCRAP04437 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.56■□□□□ 0.4
TCRAP04437 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.56■□□□□ 0.4
TCRAP04437 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TCRAP04437 CLDN5-201ENST00000403084 2357 ntBASIC17.55■□□□□ 0.4
TCRAP04437 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRAP04437 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TCRAP04437 FOXO3B-201ENST00000395675 1928 ntBASIC17.55■□□□□ 0.4
TCRAP04437 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRAP04437 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRAP04437 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRAP04437 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRAP04437 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRAP04437 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRAP04437 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TCRAP04437 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TCRAP04437 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.54■□□□□ 0.4
TCRAP04437 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms