Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.07■□□□□ 0.64
TMEM56-RWDD3S4R434 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TMEM56-RWDD3S4R434 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 C9orf163-202ENST00000624034 2573 ntBASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TMEM56-RWDD3S4R434 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
TMEM56-RWDD3S4R434 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 AL157400.5-201ENST00000507624 621 ntBASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TMEM56-RWDD3S4R434 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.02■□□□□ 0.64
TMEM56-RWDD3S4R434 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56-RWDD3S4R434 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.02■□□□□ 0.64
TMEM56-RWDD3S4R434 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56-RWDD3S4R434 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56-RWDD3S4R434 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.02■□□□□ 0.64
TMEM56-RWDD3S4R434 CR559946.2-201ENST00000623684 991 ntBASIC19.02■□□□□ 0.64
TMEM56-RWDD3S4R434 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56-RWDD3S4R434 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TMEM56-RWDD3S4R434 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM56-RWDD3S4R434 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
TMEM56-RWDD3S4R434 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM56-RWDD3S4R434 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM56-RWDD3S4R434 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.01■□□□□ 0.63
TMEM56-RWDD3S4R434 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.01■□□□□ 0.63
TMEM56-RWDD3S4R434 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM56-RWDD3S4R434 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TMEM56-RWDD3S4R434 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 ZNRF2P2-203ENST00000454624 420 ntBASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TMEM56-RWDD3S4R434 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56-RWDD3S4R434 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56-RWDD3S4R434 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TMEM56-RWDD3S4R434 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56-RWDD3S4R434 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56-RWDD3S4R434 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56-RWDD3S4R434 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56-RWDD3S4R434 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TMEM56-RWDD3S4R434 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.98■□□□□ 0.63
TMEM56-RWDD3S4R434 AL117328.2-201ENST00000624617 1940 ntBASIC18.98■□□□□ 0.63
TMEM56-RWDD3S4R434 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM56-RWDD3S4R434 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.98■□□□□ 0.63
TMEM56-RWDD3S4R434 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms