Protein–RNA interactions for Protein: Q9UK45

LSM7, U6 snRNA-associated Sm-like protein LSm7, humanhuman

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7Q9UK45 AC010997.5-201ENST00000609182 354 ntBASIC24.2■■□□□ 1.46
LSM7Q9UK45 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.2■■□□□ 1.46
LSM7Q9UK45 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.2■■□□□ 1.46
LSM7Q9UK45 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.2■■□□□ 1.46
LSM7Q9UK45 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LSM7Q9UK45 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.19■■□□□ 1.46
LSM7Q9UK45 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LSM7Q9UK45 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LSM7Q9UK45 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LSM7Q9UK45 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.18■■□□□ 1.46
LSM7Q9UK45 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LSM7Q9UK45 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LSM7Q9UK45 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
LSM7Q9UK45 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
LSM7Q9UK45 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.17■■□□□ 1.46
LSM7Q9UK45 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
LSM7Q9UK45 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LSM7Q9UK45 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.16■■□□□ 1.46
LSM7Q9UK45 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.16■■□□□ 1.46
LSM7Q9UK45 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LSM7Q9UK45 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LSM7Q9UK45 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
LSM7Q9UK45 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LSM7Q9UK45 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
LSM7Q9UK45 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LSM7Q9UK45 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.15■■□□□ 1.46
LSM7Q9UK45 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LSM7Q9UK45 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.15■■□□□ 1.46
LSM7Q9UK45 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.15■■□□□ 1.46
LSM7Q9UK45 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
LSM7Q9UK45 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.15■■□□□ 1.46
LSM7Q9UK45 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LSM7Q9UK45 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
LSM7Q9UK45 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
LSM7Q9UK45 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LSM7Q9UK45 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
LSM7Q9UK45 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.14■■□□□ 1.45
LSM7Q9UK45 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.14■■□□□ 1.45
LSM7Q9UK45 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.14■■□□□ 1.45
LSM7Q9UK45 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
LSM7Q9UK45 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
LSM7Q9UK45 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.14■■□□□ 1.45
LSM7Q9UK45 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.14■■□□□ 1.45
LSM7Q9UK45 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LSM7Q9UK45 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.14■■□□□ 1.45
LSM7Q9UK45 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
LSM7Q9UK45 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LSM7Q9UK45 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
LSM7Q9UK45 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.13■■□□□ 1.45
LSM7Q9UK45 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.13■■□□□ 1.45
LSM7Q9UK45 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LSM7Q9UK45 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.13■■□□□ 1.45
LSM7Q9UK45 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LSM7Q9UK45 SLC6A10P-202ENST00000431994 2058 ntBASIC24.12■■□□□ 1.45
LSM7Q9UK45 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LSM7Q9UK45 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.12■■□□□ 1.45
LSM7Q9UK45 MIR6724-1-201ENST00000616420 92 ntBASIC24.12■■□□□ 1.45
LSM7Q9UK45 MIR6724-2-201ENST00000616483 92 ntBASIC24.12■■□□□ 1.45
LSM7Q9UK45 MIR6724-4-201ENST00000617390 92 ntBASIC24.12■■□□□ 1.45
LSM7Q9UK45 MIR6724-3-201ENST00000622482 92 ntBASIC24.12■■□□□ 1.45
LSM7Q9UK45 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LSM7Q9UK45 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.11■■□□□ 1.45
LSM7Q9UK45 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.11■■□□□ 1.45
LSM7Q9UK45 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.11■■□□□ 1.45
LSM7Q9UK45 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.1■■□□□ 1.45
LSM7Q9UK45 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
LSM7Q9UK45 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
LSM7Q9UK45 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.1■■□□□ 1.45
LSM7Q9UK45 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.1■■□□□ 1.45
LSM7Q9UK45 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.1■■□□□ 1.45
LSM7Q9UK45 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.1■■□□□ 1.45
LSM7Q9UK45 AC008406.3-201ENST00000620001 1374 ntBASIC24.1■■□□□ 1.45
LSM7Q9UK45 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
LSM7Q9UK45 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
LSM7Q9UK45 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
LSM7Q9UK45 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.09■■□□□ 1.45
LSM7Q9UK45 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
LSM7Q9UK45 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
LSM7Q9UK45 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
LSM7Q9UK45 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.08■■□□□ 1.45
LSM7Q9UK45 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
LSM7Q9UK45 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
LSM7Q9UK45 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
LSM7Q9UK45 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.07■■□□□ 1.44
LSM7Q9UK45 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LSM7Q9UK45 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.07■■□□□ 1.44
LSM7Q9UK45 SNX5-217ENST00000606557 1087 ntBASIC24.07■■□□□ 1.44
LSM7Q9UK45 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.07■■□□□ 1.44
LSM7Q9UK45 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LSM7Q9UK45 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LSM7Q9UK45 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
LSM7Q9UK45 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
LSM7Q9UK45 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.06■■□□□ 1.44
LSM7Q9UK45 MIR6089-201ENST00000616698 64 ntBASIC24.06■■□□□ 1.44
LSM7Q9UK45 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.06■■□□□ 1.44
LSM7Q9UK45 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LSM7Q9UK45 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.05■■□□□ 1.44
LSM7Q9UK45 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.05■■□□□ 1.44
LSM7Q9UK45 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.05■■□□□ 1.44
LSM7Q9UK45 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms