Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC38.29■■■■□ 3.72
RIMBP3Q9UFD9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC38.28■■■■□ 3.72
RIMBP3Q9UFD9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC38.28■■■■□ 3.72
RIMBP3Q9UFD9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC38.28■■■■□ 3.72
RIMBP3Q9UFD9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC38.28■■■■□ 3.72
RIMBP3Q9UFD9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC38.28■■■■□ 3.72
RIMBP3Q9UFD9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
RIMBP3Q9UFD9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC38.27■■■■□ 3.72
RIMBP3Q9UFD9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC38.27■■■■□ 3.72
RIMBP3Q9UFD9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC38.27■■■■□ 3.72
RIMBP3Q9UFD9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
RIMBP3Q9UFD9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC38.25■■■■□ 3.71
RIMBP3Q9UFD9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
RIMBP3Q9UFD9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC38.25■■■■□ 3.71
RIMBP3Q9UFD9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
RIMBP3Q9UFD9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC38.24■■■■□ 3.71
RIMBP3Q9UFD9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC38.24■■■■□ 3.71
RIMBP3Q9UFD9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC38.24■■■■□ 3.71
RIMBP3Q9UFD9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
RIMBP3Q9UFD9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC38.24■■■■□ 3.71
RIMBP3Q9UFD9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC38.24■■■■□ 3.71
RIMBP3Q9UFD9 RAP2CP1-201ENST00000605103 478 ntBASIC38.24■■■■□ 3.71
RIMBP3Q9UFD9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC38.24■■■■□ 3.71
RIMBP3Q9UFD9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC38.24■■■■□ 3.71
RIMBP3Q9UFD9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
RIMBP3Q9UFD9 AC027612.3-201ENST00000413684 1047 ntBASIC38.23■■■■□ 3.71
RIMBP3Q9UFD9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
RIMBP3Q9UFD9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC38.22■■■■□ 3.71
RIMBP3Q9UFD9 AC104771.1-201ENST00000603335 964 ntBASIC38.22■■■■□ 3.71
RIMBP3Q9UFD9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
RIMBP3Q9UFD9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC38.2■■■■□ 3.71
RIMBP3Q9UFD9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC38.2■■■■□ 3.71
RIMBP3Q9UFD9 GXYLT1P5-201ENST00000614548 1189 ntBASIC38.2■■■■□ 3.71
RIMBP3Q9UFD9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC38.2■■■■□ 3.7
RIMBP3Q9UFD9 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC38.2■■■■□ 3.7
RIMBP3Q9UFD9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.7
RIMBP3Q9UFD9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
RIMBP3Q9UFD9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
RIMBP3Q9UFD9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC38.19■■■■□ 3.7
RIMBP3Q9UFD9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
RIMBP3Q9UFD9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC38.18■■■■□ 3.7
RIMBP3Q9UFD9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC38.18■■■■□ 3.7
RIMBP3Q9UFD9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC38.18■■■■□ 3.7
RIMBP3Q9UFD9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC38.18■■■■□ 3.7
RIMBP3Q9UFD9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC38.18■■■■□ 3.7
RIMBP3Q9UFD9 AC092171.4-201ENST00000609130 632 ntBASIC38.18■■■■□ 3.7
RIMBP3Q9UFD9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
RIMBP3Q9UFD9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC38.17■■■■□ 3.7
RIMBP3Q9UFD9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC38.16■■■■□ 3.7
RIMBP3Q9UFD9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC38.16■■■■□ 3.7
RIMBP3Q9UFD9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC38.16■■■■□ 3.7
RIMBP3Q9UFD9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
RIMBP3Q9UFD9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC38.16■■■■□ 3.7
RIMBP3Q9UFD9 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC38.16■■■■□ 3.7
RIMBP3Q9UFD9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC38.15■■■■□ 3.7
RIMBP3Q9UFD9 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC38.15■■■■□ 3.7
RIMBP3Q9UFD9 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
RIMBP3Q9UFD9 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC38.15■■■■□ 3.7
RIMBP3Q9UFD9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC38.14■■■■□ 3.7
RIMBP3Q9UFD9 ABCB10P3-201ENST00000561950 2166 ntBASIC38.14■■■■□ 3.7
RIMBP3Q9UFD9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC38.14■■■■□ 3.7
RIMBP3Q9UFD9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC38.14■■■■□ 3.7
RIMBP3Q9UFD9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
RIMBP3Q9UFD9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC38.13■■■■□ 3.69
RIMBP3Q9UFD9 AL138724.1-201ENST00000606771 1088 ntBASIC38.13■■■■□ 3.69
RIMBP3Q9UFD9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC38.13■■■■□ 3.69
RIMBP3Q9UFD9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
RIMBP3Q9UFD9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC38.12■■■■□ 3.69
RIMBP3Q9UFD9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
RIMBP3Q9UFD9 MPST-208ENST00000628507 698 ntTSL 5 BASIC38.12■■■■□ 3.69
RIMBP3Q9UFD9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
RIMBP3Q9UFD9 GXYLT1P2-201ENST00000433312 1230 ntBASIC38.11■■■■□ 3.69
RIMBP3Q9UFD9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
RIMBP3Q9UFD9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC38.1■■■■□ 3.69
RIMBP3Q9UFD9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC38.1■■■■□ 3.69
RIMBP3Q9UFD9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC38.1■■■■□ 3.69
RIMBP3Q9UFD9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
RIMBP3Q9UFD9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC38.09■■■■□ 3.69
RIMBP3Q9UFD9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
RIMBP3Q9UFD9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
RIMBP3Q9UFD9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC38.09■■■■□ 3.69
RIMBP3Q9UFD9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC38.08■■■■□ 3.69
RIMBP3Q9UFD9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC38.08■■■■□ 3.69
RIMBP3Q9UFD9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC38.07■■■■□ 3.69
RIMBP3Q9UFD9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC38.07■■■■□ 3.69
RIMBP3Q9UFD9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.69
RIMBP3Q9UFD9 AL355802.2-201ENST00000402069 882 ntBASIC38.07■■■■□ 3.68
RIMBP3Q9UFD9 AC123595.1-201ENST00000440769 1046 ntBASIC38.07■■■■□ 3.68
RIMBP3Q9UFD9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC38.06■■■■□ 3.68
RIMBP3Q9UFD9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC38.06■■■■□ 3.68
RIMBP3Q9UFD9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC38.06■■■■□ 3.68
RIMBP3Q9UFD9 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
RIMBP3Q9UFD9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
RIMBP3Q9UFD9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
RIMBP3Q9UFD9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC38.05■■■■□ 3.68
RIMBP3Q9UFD9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC38.05■■■■□ 3.68
RIMBP3Q9UFD9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC38.05■■■■□ 3.68
RIMBP3Q9UFD9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC38.04■■■■□ 3.68
RIMBP3Q9UFD9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC38.04■■■■□ 3.68
RIMBP3Q9UFD9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC38.03■■■■□ 3.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms