Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 LINC00543-201ENST00000567234 1845 ntBASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDH18Q9HCL0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDH18Q9HCL0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH18Q9HCL0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH18Q9HCL0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDH18Q9HCL0 AC012354.3-201ENST00000623734 483 ntBASIC24.2■■□□□ 1.46
PCDH18Q9HCL0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDH18Q9HCL0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDH18Q9HCL0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
PCDH18Q9HCL0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDH18Q9HCL0 AC090877.2-201ENST00000558441 1738 ntBASIC24.19■■□□□ 1.46
PCDH18Q9HCL0 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH18Q9HCL0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH18Q9HCL0 AC019171.1-201ENST00000601251 1056 ntBASIC24.19■■□□□ 1.46
PCDH18Q9HCL0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDH18Q9HCL0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.19■■□□□ 1.46
PCDH18Q9HCL0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDH18Q9HCL0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH18Q9HCL0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH18Q9HCL0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH18Q9HCL0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH18Q9HCL0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH18Q9HCL0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDH18Q9HCL0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDH18Q9HCL0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
PCDH18Q9HCL0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDH18Q9HCL0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
PCDH18Q9HCL0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.17■■□□□ 1.46
PCDH18Q9HCL0 BHLHE23-202ENST00000612929 1109 ntBASIC24.17■■□□□ 1.46
PCDH18Q9HCL0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDH18Q9HCL0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 PVT1_1.1-201ENST00000615125 194 ntBASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 AC141586.4-201ENST00000624558 1573 ntBASIC24.16■■□□□ 1.46
PCDH18Q9HCL0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
PCDH18Q9HCL0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH18Q9HCL0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH18Q9HCL0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH18Q9HCL0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH18Q9HCL0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDH18Q9HCL0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDH18Q9HCL0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH18Q9HCL0 AL033527.3-201ENST00000566366 1196 ntBASIC24.14■■□□□ 1.45
PCDH18Q9HCL0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH18Q9HCL0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDH18Q9HCL0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
PCDH18Q9HCL0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH18Q9HCL0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDH18Q9HCL0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.14■■□□□ 1.45
PCDH18Q9HCL0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDH18Q9HCL0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.13■■□□□ 1.45
PCDH18Q9HCL0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDH18Q9HCL0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 AC010980.1-201ENST00000587192 1142 ntBASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 AC074183.2-201ENST00000623112 922 ntBASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDH18Q9HCL0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDH18Q9HCL0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH18Q9HCL0 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH18Q9HCL0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH18Q9HCL0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDH18Q9HCL0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDH18Q9HCL0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDH18Q9HCL0 AC022616.5-201ENST00000518796 181 ntBASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms