Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PTCD2Q8WV60 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PTCD2Q8WV60 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD2Q8WV60 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD2Q8WV60 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PTCD2Q8WV60 AL451085.2-201ENST00000605085 799 ntBASIC23.63■■□□□ 1.37
PTCD2Q8WV60 AC141586.4-201ENST00000624558 1573 ntBASIC23.63■■□□□ 1.37
PTCD2Q8WV60 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PTCD2Q8WV60 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD2Q8WV60 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.62■■□□□ 1.37
PTCD2Q8WV60 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PTCD2Q8WV60 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PTCD2Q8WV60 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
PTCD2Q8WV60 LINC01124-201ENST00000409786 2117 ntBASIC23.62■■□□□ 1.37
PTCD2Q8WV60 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD2Q8WV60 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PTCD2Q8WV60 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.61■■□□□ 1.37
PTCD2Q8WV60 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.61■■□□□ 1.37
PTCD2Q8WV60 LINC00543-201ENST00000567234 1845 ntBASIC23.61■■□□□ 1.37
PTCD2Q8WV60 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.6■■□□□ 1.37
PTCD2Q8WV60 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.6■■□□□ 1.37
PTCD2Q8WV60 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD2Q8WV60 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD2Q8WV60 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.6■■□□□ 1.37
PTCD2Q8WV60 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD2Q8WV60 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PTCD2Q8WV60 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.59■■□□□ 1.37
PTCD2Q8WV60 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.59■■□□□ 1.37
PTCD2Q8WV60 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD2Q8WV60 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.59■■□□□ 1.37
PTCD2Q8WV60 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.59■■□□□ 1.37
PTCD2Q8WV60 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD2Q8WV60 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PTCD2Q8WV60 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PTCD2Q8WV60 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PTCD2Q8WV60 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.58■■□□□ 1.37
PTCD2Q8WV60 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PTCD2Q8WV60 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PTCD2Q8WV60 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.58■■□□□ 1.37
PTCD2Q8WV60 MIR4508-201ENST00000584178 70 ntBASIC23.58■■□□□ 1.37
PTCD2Q8WV60 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.58■■□□□ 1.37
PTCD2Q8WV60 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PTCD2Q8WV60 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PTCD2Q8WV60 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PTCD2Q8WV60 AC019171.1-201ENST00000601251 1056 ntBASIC23.57■■□□□ 1.36
PTCD2Q8WV60 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.57■■□□□ 1.36
PTCD2Q8WV60 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PTCD2Q8WV60 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PTCD2Q8WV60 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.55■■□□□ 1.36
PTCD2Q8WV60 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD2Q8WV60 YBX1P4-201ENST00000392794 808 ntBASIC23.55■■□□□ 1.36
PTCD2Q8WV60 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PTCD2Q8WV60 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD2Q8WV60 AC103724.3-201ENST00000564481 992 ntBASIC23.55■■□□□ 1.36
PTCD2Q8WV60 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTCD2Q8WV60 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.55■■□□□ 1.36
PTCD2Q8WV60 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.55■■□□□ 1.36
PTCD2Q8WV60 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD2Q8WV60 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD2Q8WV60 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD2Q8WV60 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.54■■□□□ 1.36
PTCD2Q8WV60 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD2Q8WV60 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD2Q8WV60 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD2Q8WV60 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD2Q8WV60 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTCD2Q8WV60 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD2Q8WV60 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD2Q8WV60 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD2Q8WV60 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD2Q8WV60 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD2Q8WV60 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD2Q8WV60 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PTCD2Q8WV60 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD2Q8WV60 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTCD2Q8WV60 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTCD2Q8WV60 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
PTCD2Q8WV60 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PTCD2Q8WV60 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PTCD2Q8WV60 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.51■■□□□ 1.35
PTCD2Q8WV60 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms