Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
FAM43AQ8N2R8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
FAM43AQ8N2R8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
FAM43AQ8N2R8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.37■■■□□ 2.13
FAM43AQ8N2R8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC28.37■■■□□ 2.13
FAM43AQ8N2R8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.37■■■□□ 2.13
FAM43AQ8N2R8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
FAM43AQ8N2R8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
FAM43AQ8N2R8 AC068473.5-201ENST00000616428 2072 ntBASIC28.36■■■□□ 2.13
FAM43AQ8N2R8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
FAM43AQ8N2R8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
FAM43AQ8N2R8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.36■■■□□ 2.13
FAM43AQ8N2R8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.36■■■□□ 2.13
FAM43AQ8N2R8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
FAM43AQ8N2R8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.36■■■□□ 2.13
FAM43AQ8N2R8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
FAM43AQ8N2R8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
FAM43AQ8N2R8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
FAM43AQ8N2R8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.35■■■□□ 2.13
FAM43AQ8N2R8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
FAM43AQ8N2R8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
FAM43AQ8N2R8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
FAM43AQ8N2R8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
FAM43AQ8N2R8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
FAM43AQ8N2R8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.34■■■□□ 2.13
FAM43AQ8N2R8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
FAM43AQ8N2R8 BX664725.1-201ENST00000438252 379 ntBASIC28.34■■■□□ 2.13
FAM43AQ8N2R8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.34■■■□□ 2.13
FAM43AQ8N2R8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
FAM43AQ8N2R8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.34■■■□□ 2.13
FAM43AQ8N2R8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
FAM43AQ8N2R8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC28.33■■■□□ 2.13
FAM43AQ8N2R8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.32■■■□□ 2.12
FAM43AQ8N2R8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
FAM43AQ8N2R8 MIR638-201ENST00000385237 100 ntBASIC28.32■■■□□ 2.12
FAM43AQ8N2R8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC28.32■■■□□ 2.12
FAM43AQ8N2R8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
FAM43AQ8N2R8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
FAM43AQ8N2R8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
FAM43AQ8N2R8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
FAM43AQ8N2R8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.31■■■□□ 2.12
FAM43AQ8N2R8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
FAM43AQ8N2R8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
FAM43AQ8N2R8 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC28.31■■■□□ 2.12
FAM43AQ8N2R8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
FAM43AQ8N2R8 ERN1-208ENST00000606895 2068 ntBASIC28.31■■■□□ 2.12
FAM43AQ8N2R8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
FAM43AQ8N2R8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
FAM43AQ8N2R8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
FAM43AQ8N2R8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
FAM43AQ8N2R8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
FAM43AQ8N2R8 KRT16P3-201ENST00000439127 1283 ntBASIC28.3■■■□□ 2.12
FAM43AQ8N2R8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.3■■■□□ 2.12
FAM43AQ8N2R8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
FAM43AQ8N2R8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
FAM43AQ8N2R8 DUSP8P4-201ENST00000399538 1761 ntBASIC28.29■■■□□ 2.12
FAM43AQ8N2R8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
FAM43AQ8N2R8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
FAM43AQ8N2R8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
FAM43AQ8N2R8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
FAM43AQ8N2R8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
FAM43AQ8N2R8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
FAM43AQ8N2R8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
FAM43AQ8N2R8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
FAM43AQ8N2R8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
FAM43AQ8N2R8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC28.28■■■□□ 2.12
FAM43AQ8N2R8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
FAM43AQ8N2R8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
FAM43AQ8N2R8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
FAM43AQ8N2R8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.27■■■□□ 2.12
FAM43AQ8N2R8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
FAM43AQ8N2R8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
FAM43AQ8N2R8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.12
FAM43AQ8N2R8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
FAM43AQ8N2R8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
FAM43AQ8N2R8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.25■■■□□ 2.11
FAM43AQ8N2R8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
FAM43AQ8N2R8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
FAM43AQ8N2R8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.24■■■□□ 2.11
FAM43AQ8N2R8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
FAM43AQ8N2R8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.24■■■□□ 2.11
FAM43AQ8N2R8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
FAM43AQ8N2R8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
FAM43AQ8N2R8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
FAM43AQ8N2R8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
FAM43AQ8N2R8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.24■■■□□ 2.11
FAM43AQ8N2R8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 AC022616.5-201ENST00000518796 181 ntBASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
FAM43AQ8N2R8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms