Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAI1Q7Z5J4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.14■□□□□ 0.82
RAI1Q7Z5J4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.14■□□□□ 0.81
RAI1Q7Z5J4 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.14■□□□□ 0.81
RAI1Q7Z5J4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAI1Q7Z5J4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAI1Q7Z5J4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAI1Q7Z5J4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAI1Q7Z5J4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.14■□□□□ 0.81
RAI1Q7Z5J4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RAI1Q7Z5J4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAI1Q7Z5J4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.13■□□□□ 0.81
RAI1Q7Z5J4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAI1Q7Z5J4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.13■□□□□ 0.81
RAI1Q7Z5J4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAI1Q7Z5J4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAI1Q7Z5J4 AC091060.1-201ENST00000623524 1766 ntBASIC20.12■□□□□ 0.81
RAI1Q7Z5J4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAI1Q7Z5J4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.12■□□□□ 0.81
RAI1Q7Z5J4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAI1Q7Z5J4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.12■□□□□ 0.81
RAI1Q7Z5J4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.12■□□□□ 0.81
RAI1Q7Z5J4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAI1Q7Z5J4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.12■□□□□ 0.81
RAI1Q7Z5J4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAI1Q7Z5J4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAI1Q7Z5J4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.1■□□□□ 0.81
RAI1Q7Z5J4 AL356740.2-201ENST00000601559 647 ntBASIC20.1■□□□□ 0.81
RAI1Q7Z5J4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.1■□□□□ 0.81
RAI1Q7Z5J4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAI1Q7Z5J4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAI1Q7Z5J4 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.1■□□□□ 0.81
RAI1Q7Z5J4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAI1Q7Z5J4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAI1Q7Z5J4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.09■□□□□ 0.81
RAI1Q7Z5J4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAI1Q7Z5J4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI1Q7Z5J4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAI1Q7Z5J4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI1Q7Z5J4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI1Q7Z5J4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAI1Q7Z5J4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.09■□□□□ 0.81
RAI1Q7Z5J4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAI1Q7Z5J4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAI1Q7Z5J4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.08■□□□□ 0.81
RAI1Q7Z5J4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.08■□□□□ 0.81
RAI1Q7Z5J4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAI1Q7Z5J4 AC096631.2-201ENST00000436136 790 ntBASIC20.08■□□□□ 0.8
RAI1Q7Z5J4 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.08■□□□□ 0.8
RAI1Q7Z5J4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RAI1Q7Z5J4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAI1Q7Z5J4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI1Q7Z5J4 DUSP8P4-201ENST00000399538 1761 ntBASIC20.07■□□□□ 0.8
RAI1Q7Z5J4 FOXO3B-201ENST00000395675 1928 ntBASIC20.07■□□□□ 0.8
RAI1Q7Z5J4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.07■□□□□ 0.8
RAI1Q7Z5J4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.07■□□□□ 0.8
RAI1Q7Z5J4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.07■□□□□ 0.8
RAI1Q7Z5J4 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
RAI1Q7Z5J4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAI1Q7Z5J4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAI1Q7Z5J4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.06■□□□□ 0.8
RAI1Q7Z5J4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.06■□□□□ 0.8
RAI1Q7Z5J4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RAI1Q7Z5J4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAI1Q7Z5J4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAI1Q7Z5J4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAI1Q7Z5J4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.05■□□□□ 0.8
RAI1Q7Z5J4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.05■□□□□ 0.8
RAI1Q7Z5J4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 SUDS3P1-201ENST00000505831 966 ntBASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.04■□□□□ 0.8
RAI1Q7Z5J4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAI1Q7Z5J4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RAI1Q7Z5J4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAI1Q7Z5J4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.03■□□□□ 0.8
RAI1Q7Z5J4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
RAI1Q7Z5J4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms