Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC29.94■■■□□ 2.38
RC3H1Q5TC82 GATM-206ENST00000558336 1522 ntTSL 2 BASIC29.94■■■□□ 2.38
RC3H1Q5TC82 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.94■■■□□ 2.38
RC3H1Q5TC82 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RC3H1Q5TC82 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
RC3H1Q5TC82 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
RC3H1Q5TC82 AL136967.2-201ENST00000623968 743 ntBASIC29.93■■■□□ 2.38
RC3H1Q5TC82 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RC3H1Q5TC82 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RC3H1Q5TC82 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC29.92■■■□□ 2.38
RC3H1Q5TC82 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
RC3H1Q5TC82 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.92■■■□□ 2.38
RC3H1Q5TC82 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RC3H1Q5TC82 MIR5787-201ENST00000611784 55 ntBASIC29.92■■■□□ 2.38
RC3H1Q5TC82 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
RC3H1Q5TC82 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC29.92■■■□□ 2.38
RC3H1Q5TC82 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
RC3H1Q5TC82 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RC3H1Q5TC82 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RC3H1Q5TC82 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.91■■■□□ 2.38
RC3H1Q5TC82 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RC3H1Q5TC82 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
RC3H1Q5TC82 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
RC3H1Q5TC82 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC29.9■■■□□ 2.38
RC3H1Q5TC82 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
RC3H1Q5TC82 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RC3H1Q5TC82 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RC3H1Q5TC82 AC104564.3-201ENST00000582367 638 ntBASIC29.89■■■□□ 2.38
RC3H1Q5TC82 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
RC3H1Q5TC82 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
RC3H1Q5TC82 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RC3H1Q5TC82 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RC3H1Q5TC82 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RC3H1Q5TC82 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC29.88■■■□□ 2.37
RC3H1Q5TC82 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.88■■■□□ 2.37
RC3H1Q5TC82 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC29.88■■■□□ 2.37
RC3H1Q5TC82 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RC3H1Q5TC82 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RC3H1Q5TC82 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RC3H1Q5TC82 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RC3H1Q5TC82 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC29.87■■■□□ 2.37
RC3H1Q5TC82 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RC3H1Q5TC82 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
RC3H1Q5TC82 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC29.87■■■□□ 2.37
RC3H1Q5TC82 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RC3H1Q5TC82 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RC3H1Q5TC82 AC004448.1-201ENST00000458332 883 ntBASIC29.86■■■□□ 2.37
RC3H1Q5TC82 AC105265.2-201ENST00000467189 838 ntBASIC29.86■■■□□ 2.37
RC3H1Q5TC82 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.86■■■□□ 2.37
RC3H1Q5TC82 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RC3H1Q5TC82 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RC3H1Q5TC82 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
RC3H1Q5TC82 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC29.85■■■□□ 2.37
RC3H1Q5TC82 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC29.85■■■□□ 2.37
RC3H1Q5TC82 MIR939-201ENST00000401314 82 ntBASIC29.85■■■□□ 2.37
RC3H1Q5TC82 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RC3H1Q5TC82 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
RC3H1Q5TC82 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RC3H1Q5TC82 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC29.85■■■□□ 2.37
RC3H1Q5TC82 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC29.84■■■□□ 2.37
RC3H1Q5TC82 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.84■■■□□ 2.37
RC3H1Q5TC82 DUX4L19-201ENST00000557448 1267 ntBASIC29.84■■■□□ 2.37
RC3H1Q5TC82 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.84■■■□□ 2.37
RC3H1Q5TC82 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC29.84■■■□□ 2.37
RC3H1Q5TC82 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC29.84■■■□□ 2.37
RC3H1Q5TC82 AC142086.6-201ENST00000621154 1765 ntBASIC29.84■■■□□ 2.37
RC3H1Q5TC82 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
RC3H1Q5TC82 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.83■■■□□ 2.37
RC3H1Q5TC82 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RC3H1Q5TC82 AF213884.3-201ENST00000563833 479 ntBASIC29.83■■■□□ 2.37
RC3H1Q5TC82 GRAMD4P4-201ENST00000613563 1115 ntBASIC29.83■■■□□ 2.37
RC3H1Q5TC82 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.83■■■□□ 2.37
RC3H1Q5TC82 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RC3H1Q5TC82 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
RC3H1Q5TC82 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RC3H1Q5TC82 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
RC3H1Q5TC82 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC29.81■■■□□ 2.36
RC3H1Q5TC82 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC29.81■■■□□ 2.36
RC3H1Q5TC82 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC29.81■■■□□ 2.36
RC3H1Q5TC82 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC29.81■■■□□ 2.36
RC3H1Q5TC82 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
RC3H1Q5TC82 AP001330.3-201ENST00000520123 633 ntBASIC29.8■■■□□ 2.36
RC3H1Q5TC82 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC29.8■■■□□ 2.36
RC3H1Q5TC82 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.8■■■□□ 2.36
RC3H1Q5TC82 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
RC3H1Q5TC82 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RC3H1Q5TC82 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC29.79■■■□□ 2.36
RC3H1Q5TC82 MIR6821-201ENST00000617625 74 ntBASIC29.79■■■□□ 2.36
RC3H1Q5TC82 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC29.79■■■□□ 2.36
RC3H1Q5TC82 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC29.79■■■□□ 2.36
RC3H1Q5TC82 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
RC3H1Q5TC82 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RC3H1Q5TC82 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RC3H1Q5TC82 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
RC3H1Q5TC82 RBM38-205ENST00000440234 686 ntTSL 2 BASIC29.78■■■□□ 2.36
RC3H1Q5TC82 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC29.78■■■□□ 2.36
RC3H1Q5TC82 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RC3H1Q5TC82 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
RC3H1Q5TC82 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.77■■■□□ 2.36
RC3H1Q5TC82 AC097639.1-201ENST00000565519 1891 ntBASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 240.7 ms