Protein–RNA interactions for Protein: Q03390

VPS60, Vacuolar protein-sorting-associated protein 60, yeastyeast

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS60Q03390 TDA7YNL176C 1911 nt5.71□□□□□ -1.5
VPS60Q03390 YHR045WYHR045W 1683 nt5.7□□□□□ -1.5
VPS60Q03390 RDL2YOR286W 450 nt5.7□□□□□ -1.5
VPS60Q03390 AAP1YHR047C 2571 nt5.7□□□□□ -1.5
VPS60Q03390 GDB1YPR184W 4611 nt5.7□□□□□ -1.5
VPS60Q03390 CHL4YDR254W 1377 nt5.69□□□□□ -1.5
VPS60Q03390 DFM1YDR411C 1026 nt5.69□□□□□ -1.5
VPS60Q03390 PHM8YER037W 966 nt5.69□□□□□ -1.5
VPS60Q03390 ROX3YBL093C 663 nt5.69□□□□□ -1.5
VPS60Q03390 YBR226CYBR226C 411 nt5.69□□□□□ -1.5
VPS60Q03390 CLF1YLR117C 2064 nt5.69□□□□□ -1.5
VPS60Q03390 AVO1YOL078W 3531 nt5.69□□□□□ -1.5
VPS60Q03390 PPR1YLR014C 2715 nt5.68□□□□□ -1.5
VPS60Q03390 ATG20YDL113C 1923 nt5.68□□□□□ -1.5
VPS60Q03390 TUP1YCR084C 2142 nt5.68□□□□□ -1.5
VPS60Q03390 MHF2YDL160C-A 243 nt5.68□□□□□ -1.5
VPS60Q03390 COX26YDR119W-A 201 nt5.68□□□□□ -1.5
VPS60Q03390 AUA1YFL010W-A 285 nt5.68□□□□□ -1.5
VPS60Q03390 ENV7YPL236C 1095 nt5.68□□□□□ -1.5
VPS60Q03390 RCK1YGL158W 1539 nt5.68□□□□□ -1.5
VPS60Q03390 PUF3YLL013C 2640 nt5.67□□□□□ -1.5
VPS60Q03390 ERD1YDR414C 1089 nt5.67□□□□□ -1.5
VPS60Q03390 GRX4YER174C 735 nt5.67□□□□□ -1.5
VPS60Q03390 RPL28YGL103W 450 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)CtN(GUU)C 74 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)FtN(GUU)F 74 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)GtN(GUU)G 74 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)KtN(GUU)K 74 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)LtN(GUU)L 74 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)N1tN(GUU)N1 74 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)N2tN(GUU)N2 74 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)O1tN(GUU)O1 74 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)O2tN(GUU)O2 74 nt5.67□□□□□ -1.5
VPS60Q03390 tN(GUU)PtN(GUU)P 74 nt5.67□□□□□ -1.5
VPS60Q03390 YHR212W-AYHR212W-A 204 nt5.67□□□□□ -1.5
VPS60Q03390 ZRT2YLR130C 1269 nt5.67□□□□□ -1.5
VPS60Q03390 YAR061WYAR061W 204 nt5.67□□□□□ -1.5
VPS60Q03390 CIT3YPR001W 1461 nt5.66□□□□□ -1.5
VPS60Q03390 PRS2YER099C 957 nt5.66□□□□□ -1.5
VPS60Q03390 PRP45YAL032C 1140 nt5.66□□□□□ -1.5
VPS60Q03390 YFL052WYFL052W 1398 nt5.66□□□□□ -1.5
VPS60Q03390 IMA1YGR287C 1770 nt5.65□□□□□ -1.5
VPS60Q03390 SRP101YDR292C 1866 nt5.65□□□□□ -1.5
VPS60Q03390 YDL144CYDL144C 1071 nt5.65□□□□□ -1.5
VPS60Q03390 MRP21YBL090W 534 nt5.65□□□□□ -1.5
VPS60Q03390 snR17bsnR17b 332 nt5.65□□□□□ -1.5
VPS60Q03390 YJL206CYJL206C 2277 nt5.65□□□□□ -1.51
VPS60Q03390 RAD53YPL153C 2466 nt5.65□□□□□ -1.51
VPS60Q03390 NOP2YNL061W 1857 nt5.64□□□□□ -1.51
VPS60Q03390 HXT14YNL318C 1623 nt5.64□□□□□ -1.51
VPS60Q03390 SPO7YAL009W 780 nt5.64□□□□□ -1.51
VPS60Q03390 RSC6YCR052W 1452 nt5.64□□□□□ -1.51
VPS60Q03390 SIF2YBR103W 1608 nt5.63□□□□□ -1.51
VPS60Q03390 HXT5YHR096C 1779 nt5.63□□□□□ -1.51
VPS60Q03390 AXL2YIL140W 2472 nt5.63□□□□□ -1.51
VPS60Q03390 YDL034WYDL034W 345 nt5.63□□□□□ -1.51
VPS60Q03390 SIT4YDL047W 936 nt5.63□□□□□ -1.51
VPS60Q03390 UTR4YEL038W 684 nt5.63□□□□□ -1.51
VPS60Q03390 YER084WYER084W 387 nt5.63□□□□□ -1.51
VPS60Q03390 SCW4YGR279C 1161 nt5.63□□□□□ -1.51
VPS60Q03390 YLL059CYLL059C 507 nt5.63□□□□□ -1.51
VPS60Q03390 ECM19YLR390W 339 nt5.63□□□□□ -1.51
VPS60Q03390 TFC7YOR110W 1308 nt5.63□□□□□ -1.51
VPS60Q03390 CHS5YLR330W 2016 nt5.62□□□□□ -1.51
VPS60Q03390 NPY1YGL067W 1155 nt5.62□□□□□ -1.51
VPS60Q03390 HSX1tR(CCU)J 72 nt5.62□□□□□ -1.51
VPS60Q03390 HLJ1YMR161W 675 nt5.62□□□□□ -1.51
VPS60Q03390 RPL21BYPL079W 483 nt5.62□□□□□ -1.51
VPS60Q03390 NTH2YBR001C 2343 nt5.62□□□□□ -1.51
VPS60Q03390 CMR1YDL156W 1569 nt5.61□□□□□ -1.51
VPS60Q03390 BRE2YLR015W 1518 nt5.61□□□□□ -1.51
VPS60Q03390 PRO2YOR323C 1371 nt5.61□□□□□ -1.51
VPS60Q03390 DDC1YPL194W 1839 nt5.61□□□□□ -1.51
VPS60Q03390 YGR125WYGR125W 3111 nt5.6□□□□□ -1.51
VPS60Q03390 CDC19YAL038W 1503 nt5.6□□□□□ -1.51
VPS60Q03390 EEB1YPL095C 1371 nt5.6□□□□□ -1.51
VPS60Q03390 YGL185CYGL185C 1140 nt5.6□□□□□ -1.51
VPS60Q03390 YGR176WYGR176W 348 nt5.6□□□□□ -1.51
VPS60Q03390 RHO3YIL118W 696 nt5.6□□□□□ -1.51
VPS60Q03390 CDC28YBR160W 897 nt5.6□□□□□ -1.51
VPS60Q03390 SPS22YCL048W 1392 nt5.59□□□□□ -1.51
VPS60Q03390 LUC7YDL087C 786 nt5.59□□□□□ -1.51
VPS60Q03390 ZRT1YGL255W 1131 nt5.59□□□□□ -1.51
VPS60Q03390 YJR085CYJR085C 318 nt5.59□□□□□ -1.51
VPS60Q03390 YLR126CYLR126C 756 nt5.59□□□□□ -1.51
VPS60Q03390 QCR2YPR191W 1107 nt5.59□□□□□ -1.51
VPS60Q03390 PAP1YKR002W 1707 nt5.59□□□□□ -1.51
VPS60Q03390 YGL072CYGL072C 360 nt5.58□□□□□ -1.52
VPS60Q03390 YPT32YGL210W 669 nt5.58□□□□□ -1.52
VPS60Q03390 RRP46YGR095C 672 nt5.58□□□□□ -1.52
VPS60Q03390 SPL2YHR136C 447 nt5.58□□□□□ -1.52
VPS60Q03390 SNO4YMR322C 714 nt5.58□□□□□ -1.52
VPS60Q03390 HSP33YOR391C 714 nt5.58□□□□□ -1.52
VPS60Q03390 HSP32YPL280W 714 nt5.58□□□□□ -1.52
VPS60Q03390 DCC1YCL016C 1143 nt5.58□□□□□ -1.52
VPS60Q03390 NOT3YIL038C 2511 nt5.58□□□□□ -1.52
VPS60Q03390 CDC16YKL022C 2523 nt5.58□□□□□ -1.52
VPS60Q03390 CRT10YOL063C 2874 nt5.58□□□□□ -1.52
VPS60Q03390 PRR1YKL116C 1557 nt5.58□□□□□ -1.52
VPS60Q03390 TOS4YLR183C 1470 nt5.58□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms